All Imperfect Repeats of Triticum monococcum chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_021760 | CAG | 4 | 675 | 686 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 52577848 |
2 | NC_021760 | AAGT | 3 | 781 | 791 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 52577848 |
3 | NC_021760 | TCTTT | 3 | 2575 | 2589 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 52577848 |
4 | NC_021760 | A | 17 | 3543 | 3559 | 17 | 100 % | 0 % | 0 % | 0 % | 5 % | Non-Coding |
5 | NC_021760 | CATT | 3 | 3707 | 3718 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
6 | NC_021760 | AT | 6 | 4169 | 4179 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
7 | NC_021760 | AT | 6 | 4185 | 4195 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
8 | NC_021760 | AT | 7 | 4201 | 4213 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
9 | NC_021760 | AAT | 4 | 4485 | 4496 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
10 | NC_021760 | TCTCT | 3 | 4699 | 4712 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 52577848 |
11 | NC_021760 | TTTAA | 3 | 5951 | 5964 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
12 | NC_021760 | TTCT | 3 | 6885 | 6895 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 52577848 |
13 | NC_021760 | T | 14 | 7459 | 7472 | 14 | 0 % | 100 % | 0 % | 0 % | 7 % | Non-Coding |
14 | NC_021760 | CTTT | 3 | 7720 | 7731 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
15 | NC_021760 | GAA | 4 | 8192 | 8203 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | Non-Coding |
16 | NC_021760 | CAAAT | 3 | 8478 | 8492 | 15 | 60 % | 20 % | 0 % | 20 % | 6 % | Non-Coding |
17 | NC_021760 | GAAA | 3 | 10147 | 10158 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52577849 |
18 | NC_021760 | TTG | 4 | 10552 | 10562 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | 52577849 |
19 | NC_021760 | AAAAAT | 3 | 11224 | 11240 | 17 | 83.33 % | 16.67 % | 0 % | 0 % | 5 % | Non-Coding |
20 | NC_021760 | AG | 6 | 11270 | 11280 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
21 | NC_021760 | CGTAG | 3 | 12178 | 12191 | 14 | 20 % | 20 % | 40 % | 20 % | 7 % | Non-Coding |
22 | NC_021760 | AAT | 4 | 13871 | 13882 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
23 | NC_021760 | CT | 6 | 14246 | 14256 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
24 | NC_021760 | TC | 8 | 14631 | 14646 | 16 | 0 % | 50 % | 0 % | 50 % | 6 % | Non-Coding |
25 | NC_021760 | TA | 7 | 14654 | 14666 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
26 | NC_021760 | CTTT | 3 | 14890 | 14901 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
27 | NC_021760 | AAAT | 3 | 16611 | 16621 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
28 | NC_021760 | TTTC | 3 | 16949 | 16959 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
29 | NC_021760 | ATCA | 3 | 17503 | 17513 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
30 | NC_021760 | T | 14 | 17745 | 17758 | 14 | 0 % | 100 % | 0 % | 0 % | 0 % | Non-Coding |
31 | NC_021760 | TACCT | 3 | 17814 | 17827 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | Non-Coding |
32 | NC_021760 | ATGA | 3 | 17876 | 17887 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
33 | NC_021760 | A | 15 | 18075 | 18089 | 15 | 100 % | 0 % | 0 % | 0 % | 6 % | Non-Coding |
34 | NC_021760 | ATA | 4 | 18850 | 18860 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
35 | NC_021760 | TTTC | 3 | 20246 | 20258 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 52577849 |
36 | NC_021760 | AGA | 4 | 20272 | 20283 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 52577849 |
37 | NC_021760 | CAACTT | 3 | 20716 | 20733 | 18 | 33.33 % | 33.33 % | 0 % | 33.33 % | 5 % | 52577849 |
38 | NC_021760 | AAC | 4 | 22928 | 22939 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 52577849 |
39 | NC_021760 | AAT | 5 | 24616 | 24630 | 15 | 66.67 % | 33.33 % | 0 % | 0 % | 0 % | 52577849 |
40 | NC_021760 | AGAA | 3 | 24847 | 24858 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52577849 |
41 | NC_021760 | TTCA | 3 | 27502 | 27512 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 52577849 |
42 | NC_021760 | A | 12 | 29502 | 29513 | 12 | 100 % | 0 % | 0 % | 0 % | 0 % | 52577849 |
43 | NC_021760 | TTAA | 3 | 29717 | 29728 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
44 | NC_021760 | ATT | 4 | 29795 | 29807 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
45 | NC_021760 | AGAA | 3 | 30702 | 30712 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
46 | NC_021760 | AT | 6 | 30744 | 30754 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
47 | NC_021760 | GTT | 5 | 31478 | 31492 | 15 | 0 % | 66.67 % | 33.33 % | 0 % | 6 % | 52577849 |
48 | NC_021760 | TA | 6 | 31956 | 31967 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
49 | NC_021760 | ATTG | 3 | 32138 | 32149 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
50 | NC_021760 | TGC | 4 | 32208 | 32219 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 52577850 |
51 | NC_021760 | CTTT | 3 | 32476 | 32486 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
52 | NC_021760 | TAGTT | 3 | 35980 | 35994 | 15 | 20 % | 60 % | 20 % | 0 % | 6 % | Non-Coding |
53 | NC_021760 | TA | 6 | 36203 | 36213 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
54 | NC_021760 | ATTG | 3 | 38157 | 38167 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 52577850 |
55 | NC_021760 | AAGA | 3 | 39404 | 39415 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52577850 |
56 | NC_021760 | GACT | 3 | 39443 | 39454 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 52577850 |
57 | NC_021760 | AATG | 3 | 39803 | 39814 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 52577850 |
58 | NC_021760 | CTA | 4 | 39873 | 39884 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 52577850 |
59 | NC_021760 | TG | 6 | 40245 | 40255 | 11 | 0 % | 50 % | 50 % | 0 % | 9 % | 52577850 |
60 | NC_021760 | CTAG | 3 | 40347 | 40359 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 52577850 |
61 | NC_021760 | ATCA | 3 | 42440 | 42450 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 52577850 |
62 | NC_021760 | AGT | 4 | 42800 | 42810 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 52577850 |
63 | NC_021760 | TCCT | 3 | 42849 | 42860 | 12 | 0 % | 50 % | 0 % | 50 % | 0 % | 52577850 |
64 | NC_021760 | T | 15 | 42949 | 42963 | 15 | 0 % | 100 % | 0 % | 0 % | 6 % | 52577850 |
65 | NC_021760 | CCATA | 3 | 43726 | 43740 | 15 | 40 % | 20 % | 0 % | 40 % | 0 % | 52577850 |
66 | NC_021760 | TTCA | 3 | 44127 | 44138 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
67 | NC_021760 | AAT | 4 | 44868 | 44878 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
68 | NC_021760 | ATCTT | 3 | 44879 | 44893 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | Non-Coding |
69 | NC_021760 | GAAA | 3 | 44962 | 44972 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
70 | NC_021760 | GGGGAA | 3 | 45061 | 45079 | 19 | 33.33 % | 0 % | 66.67 % | 0 % | 5 % | Non-Coding |
71 | NC_021760 | TA | 6 | 45890 | 45900 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
72 | NC_021760 | AAAT | 3 | 46217 | 46228 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
73 | NC_021760 | TAAA | 3 | 46281 | 46291 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
74 | NC_021760 | AGAA | 3 | 46417 | 46428 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
75 | NC_021760 | TTGA | 3 | 46741 | 46753 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
76 | NC_021760 | TAT | 5 | 47401 | 47416 | 16 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | Non-Coding |
77 | NC_021760 | T | 16 | 47421 | 47436 | 16 | 0 % | 100 % | 0 % | 0 % | 6 % | Non-Coding |
78 | NC_021760 | CTTTT | 3 | 47446 | 47459 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
79 | NC_021760 | A | 14 | 47833 | 47846 | 14 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
80 | NC_021760 | ATAAAT | 3 | 47928 | 47946 | 19 | 66.67 % | 33.33 % | 0 % | 0 % | 10 % | Non-Coding |
81 | NC_021760 | CTT | 4 | 47956 | 47967 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | Non-Coding |
82 | NC_021760 | TTATCT | 3 | 48091 | 48107 | 17 | 16.67 % | 66.67 % | 0 % | 16.67 % | 5 % | Non-Coding |
83 | NC_021760 | CAGA | 3 | 48572 | 48582 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 52577850 |
84 | NC_021760 | AGAA | 3 | 50380 | 50390 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
85 | NC_021760 | ATA | 5 | 50417 | 50430 | 14 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
86 | NC_021760 | AAACT | 3 | 50926 | 50940 | 15 | 60 % | 20 % | 0 % | 20 % | 6 % | Non-Coding |
87 | NC_021760 | AATT | 3 | 54063 | 54074 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
88 | NC_021760 | TGCA | 3 | 55626 | 55638 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 52577851 |
89 | NC_021760 | GATCAT | 3 | 56339 | 56355 | 17 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 5 % | Non-Coding |
90 | NC_021760 | AT | 6 | 56398 | 56408 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
91 | NC_021760 | AATA | 3 | 56421 | 56432 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
92 | NC_021760 | AAAG | 3 | 57610 | 57621 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
93 | NC_021760 | AAAATC | 3 | 57636 | 57652 | 17 | 66.67 % | 16.67 % | 0 % | 16.67 % | 5 % | Non-Coding |
94 | NC_021760 | TTTTA | 4 | 58107 | 58125 | 19 | 20 % | 80 % | 0 % | 0 % | 5 % | Non-Coding |
95 | NC_021760 | GAA | 4 | 58895 | 58905 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | Non-Coding |
96 | NC_021760 | ACTA | 3 | 59149 | 59159 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
97 | NC_021760 | TTC | 4 | 61115 | 61126 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 52577851 |
98 | NC_021760 | TTGT | 3 | 63262 | 63274 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
99 | NC_021760 | T | 12 | 63454 | 63465 | 12 | 0 % | 100 % | 0 % | 0 % | 0 % | Non-Coding |
100 | NC_021760 | TTA | 4 | 63721 | 63732 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
101 | NC_021760 | TTCA | 3 | 64544 | 64555 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
102 | NC_021760 | AAAG | 3 | 64661 | 64671 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
103 | NC_021760 | TCT | 4 | 64824 | 64836 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | Non-Coding |
104 | NC_021760 | AAAGA | 3 | 65320 | 65333 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | Non-Coding |
105 | NC_021760 | TATT | 3 | 65537 | 65547 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
106 | NC_021760 | TTC | 5 | 65587 | 65601 | 15 | 0 % | 66.67 % | 0 % | 33.33 % | 6 % | Non-Coding |
107 | NC_021760 | GAAA | 3 | 65861 | 65872 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52577852 |
108 | NC_021760 | TAAA | 3 | 66084 | 66095 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
109 | NC_021760 | TA | 7 | 66688 | 66700 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
110 | NC_021760 | TAA | 4 | 67374 | 67385 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
111 | NC_021760 | ATGT | 3 | 67986 | 67996 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 52577852 |
112 | NC_021760 | AGAA | 3 | 68847 | 68858 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 52577852 |
113 | NC_021760 | GAAA | 4 | 72229 | 72244 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 52577852 |
114 | NC_021760 | AGA | 4 | 74701 | 74712 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 52577852 |
115 | NC_021760 | TAT | 5 | 75758 | 75771 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 52577852 |
116 | NC_021760 | A | 17 | 76648 | 76664 | 17 | 100 % | 0 % | 0 % | 0 % | 5 % | 52577852 |
117 | NC_021760 | T | 12 | 76973 | 76984 | 12 | 0 % | 100 % | 0 % | 0 % | 8 % | 52577852 |
118 | NC_021760 | T | 12 | 76991 | 77002 | 12 | 0 % | 100 % | 0 % | 0 % | 8 % | 52577852 |
119 | NC_021760 | TTAT | 3 | 80320 | 80331 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 52577852 |
120 | NC_021760 | CTT | 5 | 80892 | 80905 | 14 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 52577852 |
121 | NC_021760 | TCTT | 3 | 80985 | 80996 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52577852 |
122 | NC_021760 | AGAAT | 3 | 81377 | 81390 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | 52577852 |
123 | NC_021760 | GAAA | 3 | 81402 | 81412 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52577852 |
124 | NC_021760 | TTC | 4 | 82006 | 82016 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 52577852 |
125 | NC_021760 | TA | 6 | 85296 | 85307 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 52577852 |
126 | NC_021760 | ATAGA | 3 | 85314 | 85327 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | 52577852 |
127 | NC_021760 | TCAAAA | 4 | 86225 | 86248 | 24 | 66.67 % | 16.67 % | 0 % | 16.67 % | 8 % | 52577852 |
128 | NC_021760 | CTT | 4 | 86975 | 86986 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 52577852 |
129 | NC_021760 | ATTCTT | 3 | 90068 | 90086 | 19 | 16.67 % | 66.67 % | 0 % | 16.67 % | 10 % | 52577852 |
130 | NC_021760 | TTTGTT | 3 | 90552 | 90570 | 19 | 0 % | 83.33 % | 16.67 % | 0 % | 10 % | 52577852 |
131 | NC_021760 | TTCT | 3 | 90691 | 90701 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 52577852 |
132 | NC_021760 | TAC | 4 | 91444 | 91455 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 52577852 |
133 | NC_021760 | AAAC | 3 | 95570 | 95582 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 52577855 |
134 | NC_021760 | ATCC | 3 | 95704 | 95715 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 52577855 |
135 | NC_021760 | ACGG | 3 | 98817 | 98828 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | Non-Coding |
136 | NC_021760 | AGGT | 3 | 99101 | 99112 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
137 | NC_021760 | AACG | 3 | 100426 | 100437 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | Non-Coding |
138 | NC_021760 | AAAG | 4 | 101748 | 101763 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
139 | NC_021760 | GAAT | 3 | 103363 | 103373 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
140 | NC_021760 | AAGG | 3 | 103375 | 103386 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | Non-Coding |
141 | NC_021760 | GAAA | 3 | 105966 | 105976 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52577855 |
142 | NC_021760 | TAA | 4 | 106082 | 106092 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 52577855 |
143 | NC_021760 | AAAG | 3 | 106707 | 106717 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52577855 |
144 | NC_021760 | AGAA | 3 | 107483 | 107493 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52577855 |
145 | NC_021760 | A | 12 | 107552 | 107563 | 12 | 100 % | 0 % | 0 % | 0 % | 0 % | 52577855 |
146 | NC_021760 | CAA | 4 | 110475 | 110485 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | 52577855 |
147 | NC_021760 | TTTA | 3 | 111820 | 111831 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 52577855 |
148 | NC_021760 | TC | 6 | 116191 | 116202 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | 52577855 |