Tetra-nucleotide Imperfect Repeats of Glycine syndetika voucher CSIRO:G1300 chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_021650 | TTCT | 3 | 133 | 144 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 2 | NC_021650 | AAGT | 3 | 1013 | 1023 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 52617631 |
| 3 | NC_021650 | CATT | 3 | 1557 | 1569 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 4 | NC_021650 | ATAA | 3 | 2603 | 2614 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52617631 |
| 5 | NC_021650 | AAAT | 4 | 3936 | 3950 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 6 | NC_021650 | TAAA | 3 | 4886 | 4897 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_021650 | GGAA | 3 | 9056 | 9068 | 13 | 50 % | 0 % | 50 % | 0 % | 7 % | 52617631 |
| 8 | NC_021650 | AAAT | 3 | 10259 | 10270 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_021650 | AAGA | 3 | 10307 | 10317 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 10 | NC_021650 | GTTT | 3 | 10420 | 10432 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 11 | NC_021650 | CAAA | 3 | 11197 | 11208 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 52617631 |
| 12 | NC_021650 | TCTA | 3 | 14195 | 14205 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 13 | NC_021650 | TTTC | 3 | 14414 | 14424 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 14 | NC_021650 | AAAG | 3 | 17831 | 17842 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52617632 |
| 15 | NC_021650 | TATC | 4 | 18410 | 18425 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 16 | NC_021650 | TAGA | 4 | 18434 | 18449 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 17 | NC_021650 | TCTT | 3 | 21183 | 21194 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617632 |
| 18 | NC_021650 | TAAA | 3 | 24362 | 24373 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 19 | NC_021650 | ATTA | 3 | 24703 | 24713 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 20 | NC_021650 | TCTA | 3 | 24759 | 24770 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 21 | NC_021650 | AAGA | 3 | 24826 | 24836 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 22 | NC_021650 | AAGC | 3 | 26603 | 26613 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 52617632 |
| 23 | NC_021650 | AATA | 3 | 28639 | 28649 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 24 | NC_021650 | TTCT | 3 | 29669 | 29680 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 25 | NC_021650 | AATT | 3 | 32682 | 32693 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 26 | NC_021650 | TTCA | 3 | 32994 | 33005 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 27 | NC_021650 | ACTT | 3 | 46502 | 46512 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 52617633 |
| 28 | NC_021650 | TAGA | 4 | 47235 | 47250 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 29 | NC_021650 | TTAA | 3 | 47323 | 47334 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_021650 | GAAA | 3 | 48043 | 48053 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 31 | NC_021650 | AATT | 3 | 49980 | 49992 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 52617633 |
| 32 | NC_021650 | TAAA | 3 | 50257 | 50268 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_021650 | AAAT | 3 | 52481 | 52492 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_021650 | TAAA | 3 | 52978 | 52988 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 35 | NC_021650 | AAAG | 3 | 54556 | 54566 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52617633 |
| 36 | NC_021650 | TTTA | 3 | 54921 | 54932 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_021650 | TTTC | 3 | 55383 | 55394 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 38 | NC_021650 | ATTT | 3 | 56571 | 56581 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617634 |
| 39 | NC_021650 | TTAT | 3 | 57287 | 57299 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 40 | NC_021650 | TATT | 3 | 60019 | 60029 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 41 | NC_021650 | TTCT | 3 | 60278 | 60288 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 42 | NC_021650 | AATA | 3 | 62403 | 62414 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 43 | NC_021650 | TTCT | 4 | 64204 | 64218 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 44 | NC_021650 | GAAA | 3 | 66954 | 66965 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52617635 |
| 45 | NC_021650 | AATT | 3 | 67523 | 67533 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 52617635 |
| 46 | NC_021650 | AAGA | 3 | 67625 | 67635 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 47 | NC_021650 | AAAT | 3 | 68323 | 68333 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 48 | NC_021650 | CTTT | 3 | 68459 | 68470 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | Non-Coding |
| 49 | NC_021650 | AAAG | 3 | 69784 | 69794 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52617635 |
| 50 | NC_021650 | GATA | 3 | 70069 | 70081 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 52617635 |
| 51 | NC_021650 | AAAG | 3 | 70706 | 70717 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52617635 |
| 52 | NC_021650 | ATTC | 3 | 71171 | 71182 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 52617635 |
| 53 | NC_021650 | ATTT | 3 | 71511 | 71522 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 52617635 |
| 54 | NC_021650 | TAAA | 3 | 73824 | 73835 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52617635 |
| 55 | NC_021650 | TTTC | 3 | 74437 | 74448 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617635 |
| 56 | NC_021650 | TATT | 3 | 74841 | 74851 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617635 |
| 57 | NC_021650 | ATCA | 3 | 78988 | 78999 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 52617635 |
| 58 | NC_021650 | CTTT | 3 | 79382 | 79393 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617635 |
| 59 | NC_021650 | ATAA | 3 | 80362 | 80373 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52617635 |
| 60 | NC_021650 | TTCT | 3 | 82180 | 82191 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617635 |
| 61 | NC_021650 | AATT | 3 | 83469 | 83480 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 52617635 |
| 62 | NC_021650 | GACT | 3 | 84676 | 84687 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 52617635 |
| 63 | NC_021650 | TTCT | 3 | 85925 | 85935 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 52617635 |
| 64 | NC_021650 | TTCT | 3 | 87876 | 87886 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 52617635 |
| 65 | NC_021650 | CTTT | 3 | 88975 | 88986 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617635 |
| 66 | NC_021650 | TGAT | 3 | 90930 | 90942 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 52617635 |
| 67 | NC_021650 | AATA | 3 | 91774 | 91786 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 52617635 |
| 68 | NC_021650 | TTGA | 3 | 92657 | 92669 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 52617635 |
| 69 | NC_021650 | ACTT | 3 | 92955 | 92965 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 52617635 |
| 70 | NC_021650 | AGAT | 3 | 96062 | 96072 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 52617635 |
| 71 | NC_021650 | CCCT | 3 | 98034 | 98044 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 52617635 |
| 72 | NC_021650 | TCTA | 3 | 102750 | 102761 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 52617635 |
| 73 | NC_021650 | GAGG | 3 | 105629 | 105640 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 52617635 |
| 74 | NC_021650 | AGGT | 3 | 105841 | 105852 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 52617635 |
| 75 | NC_021650 | TTTA | 3 | 109614 | 109626 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 52617635 |
| 76 | NC_021650 | TTTC | 3 | 110540 | 110551 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617635 |
| 77 | NC_021650 | GAAA | 3 | 113742 | 113752 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52617635 |
| 78 | NC_021650 | ATTT | 3 | 114548 | 114558 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617635 |
| 79 | NC_021650 | AAAT | 3 | 114936 | 114947 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52617635 |
| 80 | NC_021650 | AAAT | 3 | 116718 | 116728 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 52617635 |
| 81 | NC_021650 | TTTC | 3 | 117838 | 117848 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 52617635 |
| 82 | NC_021650 | ATTT | 3 | 117873 | 117884 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 52617635 |
| 83 | NC_021650 | ATCA | 3 | 120523 | 120534 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 52617635 |
| 84 | NC_021650 | ATAA | 3 | 120561 | 120571 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 52617635 |
| 85 | NC_021650 | TCAT | 3 | 120747 | 120758 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 52617635 |
| 86 | NC_021650 | TATT | 3 | 122512 | 122523 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 52617635 |
| 87 | NC_021650 | ATTT | 3 | 123099 | 123109 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617635 |
| 88 | NC_021650 | AAAT | 3 | 125614 | 125624 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 52617635 |
| 89 | NC_021650 | CATT | 3 | 126071 | 126081 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 52617635 |
| 90 | NC_021650 | ATAA | 3 | 127069 | 127080 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52617635 |
| 91 | NC_021650 | TATT | 3 | 127215 | 127225 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617635 |
| 92 | NC_021650 | TCGG | 3 | 130526 | 130536 | 11 | 0 % | 25 % | 50 % | 25 % | 9 % | 52617635 |
| 93 | NC_021650 | TCAA | 3 | 143947 | 143959 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 52617639 |
| 94 | NC_021650 | ATCA | 3 | 145716 | 145728 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 52617639 |
| 95 | NC_021650 | AAAG | 3 | 147558 | 147568 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52617639 |
| 96 | NC_021650 | TATT | 3 | 148602 | 148613 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 52617639 |
| 97 | NC_021650 | TATT | 3 | 150553 | 150564 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |