Tetra-nucleotide Imperfect Repeats of Glycine dolichocarpa voucher CSIRO:G1134 chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_021648 | TTCT | 3 | 133 | 144 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 2 | NC_021648 | AAGT | 3 | 1013 | 1023 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 52617613 |
| 3 | NC_021648 | CATT | 3 | 1557 | 1569 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 4 | NC_021648 | ATAA | 3 | 2603 | 2614 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52617613 |
| 5 | NC_021648 | AAAT | 4 | 3936 | 3950 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 6 | NC_021648 | TAAA | 3 | 4884 | 4895 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_021648 | GGAA | 3 | 9055 | 9067 | 13 | 50 % | 0 % | 50 % | 0 % | 7 % | 52617613 |
| 8 | NC_021648 | AAAT | 3 | 10256 | 10267 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_021648 | AAGA | 3 | 10304 | 10314 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 10 | NC_021648 | GTTT | 3 | 10418 | 10430 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 11 | NC_021648 | CAAA | 3 | 11195 | 11206 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 52617613 |
| 12 | NC_021648 | AAAG | 4 | 12765 | 12781 | 17 | 75 % | 0 % | 25 % | 0 % | 5 % | Non-Coding |
| 13 | NC_021648 | TCTA | 3 | 14201 | 14211 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 14 | NC_021648 | TTTC | 3 | 14419 | 14429 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 15 | NC_021648 | AAAG | 3 | 17837 | 17848 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52617614 |
| 16 | NC_021648 | TATC | 4 | 18415 | 18430 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 17 | NC_021648 | TAGA | 4 | 18439 | 18454 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 18 | NC_021648 | TCTT | 3 | 21186 | 21197 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617614 |
| 19 | NC_021648 | TAAA | 3 | 24365 | 24376 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 20 | NC_021648 | ATTA | 3 | 24706 | 24716 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 21 | NC_021648 | TCTA | 3 | 24762 | 24773 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 22 | NC_021648 | AAGA | 3 | 24829 | 24839 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 23 | NC_021648 | AAGC | 3 | 26620 | 26630 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 52617614 |
| 24 | NC_021648 | AATA | 3 | 28656 | 28666 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 25 | NC_021648 | TTCT | 3 | 29686 | 29697 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 26 | NC_021648 | TGTT | 3 | 31504 | 31515 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 27 | NC_021648 | AATT | 3 | 32685 | 32696 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 28 | NC_021648 | TTCA | 3 | 32998 | 33009 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 29 | NC_021648 | ACTT | 3 | 46492 | 46502 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 52617615 |
| 30 | NC_021648 | TAGA | 4 | 47225 | 47240 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 31 | NC_021648 | TTAA | 3 | 47316 | 47327 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 32 | NC_021648 | GAAA | 3 | 48036 | 48046 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 33 | NC_021648 | AATT | 3 | 49973 | 49985 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 52617615 |
| 34 | NC_021648 | TAAA | 3 | 50250 | 50261 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 35 | NC_021648 | AAAT | 3 | 52480 | 52491 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 36 | NC_021648 | TAAA | 3 | 52977 | 52987 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 37 | NC_021648 | AAAG | 3 | 54557 | 54567 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52617615 |
| 38 | NC_021648 | TTTA | 3 | 54921 | 54932 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 39 | NC_021648 | TTTC | 3 | 55383 | 55394 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 40 | NC_021648 | ATTT | 3 | 56594 | 56604 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617615 |
| 41 | NC_021648 | TTAT | 3 | 57304 | 57316 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 42 | NC_021648 | TATT | 3 | 60036 | 60046 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 43 | NC_021648 | TTCT | 3 | 60299 | 60309 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 44 | NC_021648 | AATA | 3 | 62423 | 62434 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 45 | NC_021648 | TTCT | 4 | 64207 | 64221 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 46 | NC_021648 | GAAA | 3 | 66941 | 66952 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52617617 |
| 47 | NC_021648 | AATT | 3 | 67510 | 67520 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 52617617 |
| 48 | NC_021648 | AAGA | 3 | 67608 | 67618 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 49 | NC_021648 | AAAT | 3 | 68306 | 68316 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 50 | NC_021648 | CTTT | 3 | 68442 | 68453 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | Non-Coding |
| 51 | NC_021648 | AAAG | 3 | 69766 | 69776 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52617617 |
| 52 | NC_021648 | GATA | 3 | 70054 | 70066 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 52617617 |
| 53 | NC_021648 | AAAG | 3 | 70691 | 70702 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52617617 |
| 54 | NC_021648 | ATTC | 3 | 71156 | 71167 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 52617617 |
| 55 | NC_021648 | ATTT | 3 | 71496 | 71507 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 52617617 |
| 56 | NC_021648 | TAAA | 3 | 73805 | 73816 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52617617 |
| 57 | NC_021648 | TTTC | 3 | 74418 | 74429 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617617 |
| 58 | NC_021648 | TATT | 3 | 74820 | 74830 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617617 |
| 59 | NC_021648 | ATCA | 3 | 78966 | 78977 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 52617617 |
| 60 | NC_021648 | CTTT | 3 | 79360 | 79371 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617617 |
| 61 | NC_021648 | TTCT | 3 | 82156 | 82167 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617617 |
| 62 | NC_021648 | AATT | 3 | 83443 | 83454 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 52617617 |
| 63 | NC_021648 | GACT | 3 | 84665 | 84676 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 52617617 |
| 64 | NC_021648 | TTCT | 3 | 85914 | 85924 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 52617617 |
| 65 | NC_021648 | TTCT | 3 | 87865 | 87875 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 52617617 |
| 66 | NC_021648 | CTTT | 3 | 88964 | 88975 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617617 |
| 67 | NC_021648 | TGAT | 3 | 90919 | 90931 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 52617617 |
| 68 | NC_021648 | AATA | 3 | 91763 | 91775 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 52617617 |
| 69 | NC_021648 | TTGA | 3 | 92646 | 92658 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 52617617 |
| 70 | NC_021648 | ACTT | 3 | 92944 | 92954 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 52617617 |
| 71 | NC_021648 | AGAT | 3 | 96051 | 96061 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 52617617 |
| 72 | NC_021648 | CCCT | 3 | 98023 | 98033 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 52617617 |
| 73 | NC_021648 | ATTT | 3 | 99620 | 99631 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 52617617 |
| 74 | NC_021648 | TCTA | 3 | 102739 | 102750 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 52617617 |
| 75 | NC_021648 | GAGG | 3 | 105618 | 105629 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 52617617 |
| 76 | NC_021648 | AGGT | 3 | 105830 | 105841 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 52617617 |
| 77 | NC_021648 | TTTA | 3 | 109603 | 109615 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 52617617 |
| 78 | NC_021648 | TTTC | 3 | 110529 | 110540 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617617 |
| 79 | NC_021648 | GAAA | 3 | 113731 | 113741 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52617617 |
| 80 | NC_021648 | ATTT | 3 | 114537 | 114547 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617617 |
| 81 | NC_021648 | AAAT | 3 | 114925 | 114936 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52617617 |
| 82 | NC_021648 | AAAT | 3 | 116707 | 116717 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 52617617 |
| 83 | NC_021648 | ATTT | 3 | 117857 | 117868 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 52617617 |
| 84 | NC_021648 | ATCA | 3 | 120507 | 120518 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 52617617 |
| 85 | NC_021648 | TCAT | 3 | 120731 | 120742 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 52617617 |
| 86 | NC_021648 | TATT | 3 | 122494 | 122505 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 52617617 |
| 87 | NC_021648 | ATTT | 3 | 123086 | 123096 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617617 |
| 88 | NC_021648 | AAAT | 3 | 125599 | 125609 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 52617617 |
| 89 | NC_021648 | CATT | 3 | 126056 | 126066 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 52617617 |
| 90 | NC_021648 | ATAA | 3 | 127054 | 127065 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52617617 |
| 91 | NC_021648 | TATT | 3 | 127200 | 127210 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617617 |
| 92 | NC_021648 | TCGG | 3 | 130538 | 130548 | 11 | 0 % | 25 % | 50 % | 25 % | 9 % | 52617617 |
| 93 | NC_021648 | TAAA | 3 | 136982 | 136992 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 52617617 |
| 94 | NC_021648 | TCAA | 3 | 143959 | 143971 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 52617621 |
| 95 | NC_021648 | ATCA | 3 | 145728 | 145740 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 52617621 |
| 96 | NC_021648 | AAAG | 3 | 147570 | 147580 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52617621 |
| 97 | NC_021648 | TATT | 3 | 148614 | 148625 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 52617621 |
| 98 | NC_021648 | TATT | 3 | 150565 | 150576 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |