Tetra-nucleotide Imperfect Repeats of Glycine canescens voucher CSIRO:G1232 chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_021647 | TTCT | 3 | 133 | 144 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 2 | NC_021647 | AAGT | 3 | 1013 | 1023 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 52617604 |
| 3 | NC_021647 | CATT | 3 | 1557 | 1569 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 4 | NC_021647 | ATAA | 3 | 2603 | 2614 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52617604 |
| 5 | NC_021647 | AAAT | 4 | 3936 | 3950 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 6 | NC_021647 | TAAA | 3 | 4877 | 4888 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_021647 | GGAA | 3 | 9051 | 9063 | 13 | 50 % | 0 % | 50 % | 0 % | 7 % | 52617604 |
| 8 | NC_021647 | AAAT | 3 | 10254 | 10265 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_021647 | AAGA | 3 | 10302 | 10312 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 10 | NC_021647 | GTTT | 3 | 10415 | 10427 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 11 | NC_021647 | CAAA | 3 | 11203 | 11214 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 52617605 |
| 12 | NC_021647 | TCTA | 3 | 14204 | 14214 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 13 | NC_021647 | TTTC | 3 | 14421 | 14431 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 14 | NC_021647 | AAAG | 3 | 17833 | 17844 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52617605 |
| 15 | NC_021647 | TATC | 4 | 18412 | 18427 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 16 | NC_021647 | TAGA | 4 | 18436 | 18451 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 17 | NC_021647 | TCTT | 3 | 21185 | 21196 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617605 |
| 18 | NC_021647 | TAAA | 3 | 24364 | 24375 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 19 | NC_021647 | ATTA | 3 | 24704 | 24714 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 20 | NC_021647 | TCTA | 3 | 24760 | 24771 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 21 | NC_021647 | AAGA | 3 | 24827 | 24837 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 22 | NC_021647 | AAGC | 3 | 26606 | 26616 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 52617605 |
| 23 | NC_021647 | AATA | 3 | 28642 | 28652 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 24 | NC_021647 | TTCT | 3 | 29672 | 29683 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 25 | NC_021647 | TGTT | 3 | 31492 | 31503 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 26 | NC_021647 | AATT | 3 | 32666 | 32677 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_021647 | TTCA | 3 | 32976 | 32987 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 28 | NC_021647 | ACTT | 3 | 46461 | 46471 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 52617606 |
| 29 | NC_021647 | TTAA | 3 | 47279 | 47290 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_021647 | GAAA | 3 | 47997 | 48007 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 31 | NC_021647 | AATT | 3 | 49934 | 49946 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 52617606 |
| 32 | NC_021647 | TAAA | 3 | 50211 | 50222 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_021647 | AAAT | 3 | 52443 | 52454 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_021647 | TAAA | 3 | 52940 | 52950 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 35 | NC_021647 | AAAG | 3 | 54513 | 54523 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52617607 |
| 36 | NC_021647 | TTTA | 3 | 54876 | 54887 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_021647 | TTTC | 3 | 55338 | 55349 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 38 | NC_021647 | ATTT | 3 | 56527 | 56537 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617607 |
| 39 | NC_021647 | TTAT | 3 | 57242 | 57254 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 40 | NC_021647 | TATT | 3 | 59974 | 59984 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 41 | NC_021647 | TTCT | 3 | 60234 | 60244 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 42 | NC_021647 | AATA | 3 | 62359 | 62370 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 43 | NC_021647 | TTCT | 4 | 64146 | 64160 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 44 | NC_021647 | GAAA | 3 | 66719 | 66730 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52617608 |
| 45 | NC_021647 | AATT | 3 | 67288 | 67298 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 52617608 |
| 46 | NC_021647 | AAGA | 3 | 67390 | 67400 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 47 | NC_021647 | AAAT | 3 | 68089 | 68099 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 48 | NC_021647 | CTTT | 3 | 68225 | 68236 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | Non-Coding |
| 49 | NC_021647 | AAAG | 3 | 69536 | 69546 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52617608 |
| 50 | NC_021647 | GATA | 3 | 69822 | 69834 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 52617608 |
| 51 | NC_021647 | AAAG | 3 | 70459 | 70470 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52617608 |
| 52 | NC_021647 | ATTC | 3 | 70924 | 70935 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 52617608 |
| 53 | NC_021647 | ATTT | 3 | 71264 | 71275 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 52617608 |
| 54 | NC_021647 | TAAA | 3 | 73577 | 73588 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52617608 |
| 55 | NC_021647 | TTTC | 3 | 74190 | 74201 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617608 |
| 56 | NC_021647 | TATT | 3 | 74592 | 74602 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617608 |
| 57 | NC_021647 | ATCA | 3 | 78740 | 78751 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 52617608 |
| 58 | NC_021647 | CTTT | 3 | 79134 | 79145 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617608 |
| 59 | NC_021647 | TTCT | 3 | 81925 | 81936 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617608 |
| 60 | NC_021647 | AATT | 3 | 83214 | 83225 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 52617608 |
| 61 | NC_021647 | GACT | 3 | 84411 | 84422 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 52617608 |
| 62 | NC_021647 | TTCT | 3 | 85660 | 85670 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 52617608 |
| 63 | NC_021647 | TTCT | 3 | 87611 | 87621 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 52617608 |
| 64 | NC_021647 | CTTT | 3 | 88710 | 88721 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617608 |
| 65 | NC_021647 | TGAT | 3 | 90665 | 90677 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 52617608 |
| 66 | NC_021647 | AATA | 3 | 91509 | 91521 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 52617608 |
| 67 | NC_021647 | TTGA | 3 | 92392 | 92404 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 52617608 |
| 68 | NC_021647 | ACTT | 3 | 92690 | 92700 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 52617608 |
| 69 | NC_021647 | AGAT | 3 | 95797 | 95807 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 52617608 |
| 70 | NC_021647 | CCCT | 3 | 97769 | 97779 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 52617608 |
| 71 | NC_021647 | TCTA | 3 | 102485 | 102496 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 52617608 |
| 72 | NC_021647 | GAGG | 3 | 105364 | 105375 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 52617608 |
| 73 | NC_021647 | AGGT | 3 | 105576 | 105587 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 52617608 |
| 74 | NC_021647 | TTTA | 3 | 109349 | 109361 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 52617608 |
| 75 | NC_021647 | TTTC | 3 | 110275 | 110286 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52617608 |
| 76 | NC_021647 | GAAA | 3 | 113477 | 113487 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52617608 |
| 77 | NC_021647 | ATTT | 3 | 114283 | 114293 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617608 |
| 78 | NC_021647 | AAAT | 3 | 114671 | 114682 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52617608 |
| 79 | NC_021647 | AAAT | 3 | 116453 | 116463 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 52617608 |
| 80 | NC_021647 | ATTT | 3 | 117616 | 117627 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 52617608 |
| 81 | NC_021647 | ATCA | 3 | 120266 | 120277 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 52617608 |
| 82 | NC_021647 | ATAA | 3 | 120304 | 120314 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 52617608 |
| 83 | NC_021647 | TCAT | 3 | 120490 | 120501 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 52617608 |
| 84 | NC_021647 | TATT | 3 | 122257 | 122268 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 52617608 |
| 85 | NC_021647 | ATTT | 3 | 122845 | 122855 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617608 |
| 86 | NC_021647 | AAAT | 3 | 125354 | 125364 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 52617608 |
| 87 | NC_021647 | CATT | 3 | 125811 | 125821 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 52617608 |
| 88 | NC_021647 | ATAA | 3 | 126809 | 126820 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52617608 |
| 89 | NC_021647 | TATT | 3 | 126955 | 126965 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52617608 |
| 90 | NC_021647 | TCGG | 3 | 130266 | 130276 | 11 | 0 % | 25 % | 50 % | 25 % | 9 % | 52617608 |
| 91 | NC_021647 | TCAA | 3 | 143687 | 143699 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 52617612 |
| 92 | NC_021647 | ATCA | 3 | 145456 | 145468 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 52617612 |
| 93 | NC_021647 | AAAG | 3 | 147298 | 147308 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52617612 |
| 94 | NC_021647 | TATT | 3 | 148342 | 148353 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 52617612 |
| 95 | NC_021647 | TATT | 3 | 150293 | 150304 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |