Tetra-nucleotide Imperfect Repeats of Glycine tomentella voucher CSIRO:G1403 chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_021636 | TTCT | 3 | 133 | 144 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 2 | NC_021636 | AAGT | 3 | 1013 | 1023 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 52085056 |
| 3 | NC_021636 | CATT | 3 | 1557 | 1569 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 4 | NC_021636 | ATAA | 3 | 2603 | 2614 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52085056 |
| 5 | NC_021636 | AAAT | 4 | 3936 | 3950 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 6 | NC_021636 | TAAA | 3 | 4887 | 4898 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_021636 | GGAA | 3 | 9078 | 9090 | 13 | 50 % | 0 % | 50 % | 0 % | 7 % | 52085056 |
| 8 | NC_021636 | AAAT | 3 | 10278 | 10289 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_021636 | AAGA | 3 | 10326 | 10336 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 10 | NC_021636 | GTTT | 3 | 10439 | 10451 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 11 | NC_021636 | CAAA | 3 | 11209 | 11220 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 52085057 |
| 12 | NC_021636 | TCTA | 3 | 14206 | 14216 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 13 | NC_021636 | TTTC | 3 | 14424 | 14434 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 14 | NC_021636 | AAAG | 3 | 17834 | 17845 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52085057 |
| 15 | NC_021636 | TATC | 4 | 18413 | 18428 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 16 | NC_021636 | TAGA | 4 | 18437 | 18452 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 17 | NC_021636 | TCTT | 3 | 21174 | 21185 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52085057 |
| 18 | NC_021636 | TAAA | 3 | 24353 | 24364 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 19 | NC_021636 | ATTA | 3 | 24694 | 24704 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 20 | NC_021636 | TCTA | 3 | 24750 | 24761 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 21 | NC_021636 | AAGA | 3 | 24817 | 24827 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 22 | NC_021636 | AAGC | 3 | 26606 | 26616 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 52085057 |
| 23 | NC_021636 | AATA | 3 | 28642 | 28652 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 24 | NC_021636 | TTCT | 3 | 29690 | 29701 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 25 | NC_021636 | TGTT | 3 | 31496 | 31507 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 26 | NC_021636 | AATT | 3 | 32670 | 32681 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_021636 | TTCA | 3 | 32977 | 32988 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 28 | NC_021636 | TAGA | 4 | 47209 | 47224 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 29 | NC_021636 | TTAA | 3 | 47297 | 47308 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_021636 | GAAA | 3 | 48019 | 48029 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 31 | NC_021636 | AATT | 3 | 49957 | 49969 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 52085058 |
| 32 | NC_021636 | TAAA | 3 | 50234 | 50245 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_021636 | AAAT | 3 | 52480 | 52491 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_021636 | TAAA | 3 | 52977 | 52987 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 35 | NC_021636 | AAAG | 3 | 54553 | 54563 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52085059 |
| 36 | NC_021636 | TTTA | 3 | 54916 | 54927 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_021636 | TTTC | 3 | 55384 | 55395 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 38 | NC_021636 | ATTT | 3 | 56572 | 56582 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52085059 |
| 39 | NC_021636 | TTAT | 3 | 57288 | 57300 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 40 | NC_021636 | TTCT | 3 | 60273 | 60283 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 41 | NC_021636 | AATA | 3 | 62398 | 62409 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 42 | NC_021636 | TTCT | 4 | 64185 | 64199 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 43 | NC_021636 | TTTA | 3 | 66271 | 66282 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 44 | NC_021636 | AATT | 3 | 66632 | 66642 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 45 | NC_021636 | GAAA | 3 | 66903 | 66914 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52085060 |
| 46 | NC_021636 | AATT | 3 | 67472 | 67482 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 52085060 |
| 47 | NC_021636 | AAGA | 3 | 67574 | 67584 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 48 | NC_021636 | AAAT | 3 | 67679 | 67690 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 49 | NC_021636 | AAAT | 3 | 68272 | 68282 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 50 | NC_021636 | CTTT | 3 | 68408 | 68419 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | Non-Coding |
| 51 | NC_021636 | AAGA | 3 | 69728 | 69738 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52085060 |
| 52 | NC_021636 | GATA | 3 | 70012 | 70024 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 52085060 |
| 53 | NC_021636 | AAAG | 3 | 70649 | 70660 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 52085060 |
| 54 | NC_021636 | ATTC | 3 | 71114 | 71125 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 52085060 |
| 55 | NC_021636 | ATTT | 3 | 71454 | 71465 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 52085060 |
| 56 | NC_021636 | TAAA | 3 | 73767 | 73778 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52085060 |
| 57 | NC_021636 | TTTC | 3 | 74380 | 74391 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52085060 |
| 58 | NC_021636 | TATT | 3 | 74783 | 74793 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52085060 |
| 59 | NC_021636 | ATCA | 3 | 78932 | 78943 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 52085060 |
| 60 | NC_021636 | CTTT | 3 | 79326 | 79337 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52085060 |
| 61 | NC_021636 | TTCT | 3 | 82127 | 82138 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52085060 |
| 62 | NC_021636 | AATT | 3 | 83411 | 83422 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 52085060 |
| 63 | NC_021636 | GACT | 3 | 84623 | 84634 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 52085060 |
| 64 | NC_021636 | TTCT | 3 | 85872 | 85882 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 52085060 |
| 65 | NC_021636 | TTCT | 3 | 87823 | 87833 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 52085060 |
| 66 | NC_021636 | CTTT | 3 | 88922 | 88933 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52085060 |
| 67 | NC_021636 | TGAT | 3 | 90877 | 90889 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 52085060 |
| 68 | NC_021636 | AATA | 3 | 91721 | 91733 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 52085060 |
| 69 | NC_021636 | TTGA | 3 | 92604 | 92616 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 52085060 |
| 70 | NC_021636 | ACTT | 3 | 92902 | 92912 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 52085060 |
| 71 | NC_021636 | AGAT | 3 | 96009 | 96019 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 52085060 |
| 72 | NC_021636 | CCCT | 3 | 97981 | 97991 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 52085060 |
| 73 | NC_021636 | TCTA | 3 | 102696 | 102707 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 52085060 |
| 74 | NC_021636 | GAGG | 3 | 105575 | 105586 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 52085060 |
| 75 | NC_021636 | AGGT | 3 | 105787 | 105798 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 52085060 |
| 76 | NC_021636 | TTTA | 3 | 109560 | 109572 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 52085060 |
| 77 | NC_021636 | TTTC | 3 | 110486 | 110497 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 52085060 |
| 78 | NC_021636 | GAAA | 3 | 113685 | 113695 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52085060 |
| 79 | NC_021636 | ATTT | 3 | 114491 | 114501 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52085060 |
| 80 | NC_021636 | AAAT | 3 | 114879 | 114890 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52085060 |
| 81 | NC_021636 | AAAT | 3 | 116661 | 116671 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 52085060 |
| 82 | NC_021636 | ATTT | 3 | 117814 | 117825 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 52085060 |
| 83 | NC_021636 | ATCA | 3 | 120471 | 120482 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 52085060 |
| 84 | NC_021636 | ATAA | 3 | 120509 | 120519 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 52085060 |
| 85 | NC_021636 | TCAT | 3 | 120695 | 120706 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 52085060 |
| 86 | NC_021636 | TATT | 3 | 122458 | 122469 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 52085060 |
| 87 | NC_021636 | ATTT | 3 | 123047 | 123057 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52085060 |
| 88 | NC_021636 | AAAT | 3 | 125551 | 125561 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 52085060 |
| 89 | NC_021636 | CATT | 3 | 126008 | 126018 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 52085060 |
| 90 | NC_021636 | ATAA | 3 | 127006 | 127017 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 52085060 |
| 91 | NC_021636 | TATT | 3 | 127152 | 127162 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 52085060 |
| 92 | NC_021636 | TCGG | 3 | 130463 | 130473 | 11 | 0 % | 25 % | 50 % | 25 % | 9 % | 52085060 |
| 93 | NC_021636 | TCAA | 3 | 143883 | 143895 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 52085064 |
| 94 | NC_021636 | ATCA | 3 | 145652 | 145664 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 52085064 |
| 95 | NC_021636 | AAAG | 3 | 147494 | 147504 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 52085064 |
| 96 | NC_021636 | TATT | 3 | 148538 | 148549 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 52085064 |
| 97 | NC_021636 | TATT | 3 | 150489 | 150500 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |