Tetra-nucleotide Imperfect Repeats of Pinus taeda chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_021440 | GATG | 3 | 1623 | 1635 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | Non-Coding |
| 2 | NC_021440 | TCTA | 3 | 4270 | 4280 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 3 | NC_021440 | ATGA | 3 | 5168 | 5179 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 4 | NC_021440 | CCTT | 3 | 7032 | 7042 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 51272170 |
| 5 | NC_021440 | ATGT | 3 | 7778 | 7788 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 6 | NC_021440 | CTTT | 3 | 8098 | 8108 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 7 | NC_021440 | ATTC | 3 | 9432 | 9443 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 8 | NC_021440 | TTTA | 3 | 11064 | 11074 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 51272170 |
| 9 | NC_021440 | ATTT | 3 | 13760 | 13772 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 51272170 |
| 10 | NC_021440 | ATGA | 3 | 27042 | 27053 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 11 | NC_021440 | ATCC | 3 | 27288 | 27298 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | Non-Coding |
| 12 | NC_021440 | TAGA | 3 | 34155 | 34165 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51272171 |
| 13 | NC_021440 | GAAA | 3 | 41242 | 41252 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 51272171 |
| 14 | NC_021440 | TTTA | 3 | 42146 | 42157 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 51272171 |
| 15 | NC_021440 | GATG | 4 | 48858 | 48877 | 20 | 25 % | 25 % | 50 % | 0 % | 5 % | 51272171 |
| 16 | NC_021440 | GAAA | 3 | 50402 | 50412 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 51272171 |
| 17 | NC_021440 | GAAG | 3 | 51614 | 51625 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 51272171 |
| 18 | NC_021440 | TCTA | 3 | 51752 | 51763 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 51272171 |
| 19 | NC_021440 | TGAA | 3 | 51857 | 51868 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 51272171 |
| 20 | NC_021440 | ATTC | 3 | 53507 | 53518 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51272171 |
| 21 | NC_021440 | TCGT | 3 | 61950 | 61960 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 51272171 |
| 22 | NC_021440 | AATT | 3 | 65543 | 65553 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 51272171 |
| 23 | NC_021440 | TTCT | 4 | 70164 | 70178 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | 51272171 |
| 24 | NC_021440 | AATT | 3 | 80004 | 80014 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 51272171 |
| 25 | NC_021440 | TTTC | 3 | 81853 | 81864 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 51272171 |
| 26 | NC_021440 | GATC | 3 | 83510 | 83521 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 51272171 |
| 27 | NC_021440 | ATCC | 3 | 87278 | 87289 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 51272171 |
| 28 | NC_021440 | GAGG | 3 | 90530 | 90541 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 51272171 |
| 29 | NC_021440 | AGGT | 3 | 90738 | 90749 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 51272171 |
| 30 | NC_021440 | AACC | 3 | 92358 | 92370 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | 51272171 |
| 31 | NC_021440 | ATGG | 3 | 101644 | 101655 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 51272171 |
| 32 | NC_021440 | TTCT | 3 | 102664 | 102674 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 51272171 |
| 33 | NC_021440 | TTGA | 3 | 109955 | 109965 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 51272171 |
| 34 | NC_021440 | ACAA | 3 | 110783 | 110794 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 51272171 |
| 35 | NC_021440 | ATAA | 3 | 112928 | 112938 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 36 | NC_021440 | AAAG | 3 | 112939 | 112949 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 37 | NC_021440 | TGAG | 3 | 116648 | 116660 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | 51272176 |
| 38 | NC_021440 | TCAA | 3 | 118545 | 118555 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 51272176 |
| 39 | NC_021440 | TTGA | 3 | 120440 | 120450 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 51272176 |