Tetra-nucleotide Imperfect Repeats of Cunninghamia lanceolata chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_021437 | CTTT | 3 | 1296 | 1306 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 2 | NC_021437 | TATT | 3 | 1771 | 1782 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 51272147 |
| 3 | NC_021437 | TTGA | 3 | 2029 | 2040 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 51272147 |
| 4 | NC_021437 | TCCA | 3 | 2922 | 2933 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 51272147 |
| 5 | NC_021437 | TAAA | 3 | 4134 | 4145 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 6 | NC_021437 | ATCT | 3 | 5075 | 5086 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51272147 |
| 7 | NC_021437 | ATCT | 3 | 5096 | 5107 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51272147 |
| 8 | NC_021437 | CTAG | 3 | 5900 | 5911 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 51272147 |
| 9 | NC_021437 | TTTC | 3 | 9347 | 9357 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 10 | NC_021437 | AAAG | 3 | 17063 | 17074 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 51272148 |
| 11 | NC_021437 | GAAA | 3 | 17111 | 17121 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 51272148 |
| 12 | NC_021437 | AATT | 3 | 21849 | 21861 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 13 | NC_021437 | GGAT | 3 | 26595 | 26605 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | Non-Coding |
| 14 | NC_021437 | AAAT | 3 | 27251 | 27262 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 51272148 |
| 15 | NC_021437 | TTAT | 3 | 28524 | 28535 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 51272148 |
| 16 | NC_021437 | TTAG | 3 | 32199 | 32209 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 51272149 |
| 17 | NC_021437 | ATTC | 3 | 35182 | 35193 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51272149 |
| 18 | NC_021437 | AAAT | 3 | 36557 | 36568 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 51272149 |
| 19 | NC_021437 | GAAA | 3 | 37601 | 37612 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 20 | NC_021437 | TAAA | 3 | 38937 | 38948 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 21 | NC_021437 | CAAT | 3 | 39086 | 39098 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 22 | NC_021437 | AAAT | 3 | 39805 | 39817 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 51272149 |
| 23 | NC_021437 | TTGA | 3 | 40406 | 40417 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 51272149 |
| 24 | NC_021437 | GCGA | 3 | 40713 | 40724 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | 51272149 |
| 25 | NC_021437 | ATTG | 3 | 41578 | 41588 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 51272149 |
| 26 | NC_021437 | TTTC | 3 | 43145 | 43155 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 27 | NC_021437 | AAAG | 3 | 47229 | 47240 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 28 | NC_021437 | CTAC | 3 | 48806 | 48817 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | Non-Coding |
| 29 | NC_021437 | TGAA | 3 | 50897 | 50907 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 30 | NC_021437 | CTTG | 3 | 52680 | 52691 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | Non-Coding |
| 31 | NC_021437 | CCTT | 3 | 54259 | 54269 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 32 | NC_021437 | ATTA | 3 | 56038 | 56049 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_021437 | AAAG | 3 | 56594 | 56604 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 34 | NC_021437 | AAAT | 3 | 59469 | 59479 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 51272150 |
| 35 | NC_021437 | TTTA | 3 | 61819 | 61831 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 51272150 |
| 36 | NC_021437 | AAAG | 3 | 62328 | 62340 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 51272150 |
| 37 | NC_021437 | ATTC | 3 | 64785 | 64796 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51272150 |
| 38 | NC_021437 | AAAT | 3 | 65471 | 65482 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 51272150 |
| 39 | NC_021437 | TAGG | 3 | 65683 | 65694 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 51272150 |
| 40 | NC_021437 | GAAA | 3 | 66026 | 66036 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 51272150 |
| 41 | NC_021437 | ATCT | 3 | 67952 | 67963 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 51272150 |
| 42 | NC_021437 | AATT | 3 | 70312 | 70322 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 51272150 |
| 43 | NC_021437 | ATTG | 3 | 73054 | 73064 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 51272150 |
| 44 | NC_021437 | ATTT | 3 | 76315 | 76327 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 51272150 |
| 45 | NC_021437 | AGAT | 3 | 81124 | 81134 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51272150 |
| 46 | NC_021437 | CTTG | 3 | 81408 | 81419 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 51272150 |
| 47 | NC_021437 | CATT | 3 | 83448 | 83459 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51272150 |
| 48 | NC_021437 | TACC | 3 | 86476 | 86486 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 51272150 |
| 49 | NC_021437 | TTAT | 3 | 88814 | 88826 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 51272150 |
| 50 | NC_021437 | TTGT | 3 | 89321 | 89332 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 51272150 |
| 51 | NC_021437 | CTTT | 3 | 91034 | 91044 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 51272150 |
| 52 | NC_021437 | AATA | 3 | 92077 | 92088 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 51272150 |
| 53 | NC_021437 | CTTT | 3 | 92591 | 92603 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 51272150 |
| 54 | NC_021437 | TAGA | 3 | 93788 | 93798 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51272150 |
| 55 | NC_021437 | TTAT | 3 | 94306 | 94317 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 56 | NC_021437 | AATT | 3 | 96536 | 96547 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 51272153 |
| 57 | NC_021437 | AAAT | 3 | 99706 | 99716 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 51272153 |
| 58 | NC_021437 | AAAG | 3 | 100434 | 100444 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 51272153 |
| 59 | NC_021437 | AAGA | 3 | 100593 | 100604 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 51272153 |
| 60 | NC_021437 | AAAG | 3 | 101432 | 101442 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 51272153 |
| 61 | NC_021437 | ATTA | 3 | 105966 | 105977 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 51272153 |
| 62 | NC_021437 | GAAA | 3 | 107316 | 107326 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 63 | NC_021437 | AATT | 3 | 108109 | 108119 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 64 | NC_021437 | GAAT | 3 | 110060 | 110070 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51272154 |
| 65 | NC_021437 | ATAA | 3 | 112389 | 112400 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 66 | NC_021437 | TTTC | 3 | 113932 | 113943 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 51272154 |
| 67 | NC_021437 | TATC | 3 | 116668 | 116679 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 68 | NC_021437 | GGAG | 3 | 116692 | 116702 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | Non-Coding |
| 69 | NC_021437 | GAAA | 3 | 116755 | 116765 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 70 | NC_021437 | CAAT | 3 | 118571 | 118581 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 71 | NC_021437 | ATCT | 3 | 120053 | 120063 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 51272154 |
| 72 | NC_021437 | TCTT | 3 | 121226 | 121236 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 51272154 |
| 73 | NC_021437 | TTTC | 3 | 124910 | 124921 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 51272154 |
| 74 | NC_021437 | TTTA | 3 | 129067 | 129078 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 75 | NC_021437 | TTTC | 3 | 131375 | 131386 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 76 | NC_021437 | AATA | 3 | 131572 | 131583 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 77 | NC_021437 | TTGA | 3 | 132537 | 132548 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 51272155 |
| 78 | NC_021437 | TATT | 5 | 135025 | 135044 | 20 | 25 % | 75 % | 0 % | 0 % | 10 % | Non-Coding |
| 79 | NC_021437 | TTTG | 3 | 135117 | 135128 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |