Tetra-nucleotide Imperfect Repeats of Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_021432 | ATGG | 3 | 1421 | 1432 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 2 | NC_021432 | ATAA | 3 | 1569 | 1579 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 3 | NC_021432 | TTAA | 3 | 4493 | 4504 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_021432 | AAAT | 3 | 4625 | 4636 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 5 | NC_021432 | ATTT | 3 | 6408 | 6418 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_021432 | CTAT | 3 | 9834 | 9845 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 7 | NC_021432 | TAGA | 3 | 10056 | 10066 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51194346 |
| 8 | NC_021432 | GTCT | 3 | 10970 | 10981 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 51194346 |
| 9 | NC_021432 | AAAT | 3 | 12202 | 12212 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 51194346 |
| 10 | NC_021432 | CTTT | 3 | 12488 | 12498 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 51194346 |
| 11 | NC_021432 | ACTA | 3 | 13727 | 13738 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 12 | NC_021432 | ATTT | 3 | 15824 | 15834 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 13 | NC_021432 | TCAA | 3 | 16139 | 16150 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 51194345 |
| 14 | NC_021432 | TTCA | 3 | 22034 | 22045 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51194345 |
| 15 | NC_021432 | AAAG | 3 | 22380 | 22395 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 51194345 |
| 16 | NC_021432 | GAAA | 3 | 25700 | 25712 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 51194345 |
| 17 | NC_021432 | TTAA | 3 | 26679 | 26690 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 18 | NC_021432 | AGCT | 3 | 26899 | 26910 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 19 | NC_021432 | AAGT | 3 | 28002 | 28012 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 20 | NC_021432 | GAAA | 3 | 28687 | 28697 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 21 | NC_021432 | TATT | 3 | 29398 | 29409 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 22 | NC_021432 | TTCT | 3 | 30134 | 30145 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 23 | NC_021432 | AGTA | 3 | 30489 | 30499 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 24 | NC_021432 | TAAA | 4 | 31700 | 31715 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 25 | NC_021432 | AATA | 3 | 32861 | 32871 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 26 | NC_021432 | TTCT | 3 | 33288 | 33298 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 27 | NC_021432 | GAAA | 3 | 35004 | 35015 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 51194346 |
| 28 | NC_021432 | TTTA | 3 | 35977 | 35987 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 29 | NC_021432 | AAAG | 3 | 36303 | 36314 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | Non-Coding |
| 30 | NC_021432 | ACAA | 3 | 37745 | 37756 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 31 | NC_021432 | AAGA | 3 | 40237 | 40248 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 51194345 |
| 32 | NC_021432 | AATG | 3 | 40636 | 40647 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 51194345 |
| 33 | NC_021432 | TTTA | 3 | 42384 | 42395 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_021432 | TCTT | 3 | 43791 | 43802 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 51194345 |
| 35 | NC_021432 | TTGA | 3 | 47494 | 47506 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 36 | NC_021432 | ATTT | 3 | 51145 | 51155 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 37 | NC_021432 | TTCT | 3 | 55024 | 55035 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 38 | NC_021432 | TTCA | 3 | 55471 | 55481 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 39 | NC_021432 | ATTT | 3 | 58644 | 58654 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 51194346 |
| 40 | NC_021432 | AAAT | 3 | 59398 | 59409 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 51194346 |
| 41 | NC_021432 | AAAT | 3 | 59414 | 59424 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 42 | NC_021432 | GAAA | 3 | 62930 | 62942 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 51194347 |
| 43 | NC_021432 | TTTC | 3 | 64015 | 64026 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 44 | NC_021432 | AGAA | 3 | 64046 | 64057 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 45 | NC_021432 | ATTA | 4 | 67669 | 67683 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 46 | NC_021432 | TTCT | 3 | 67897 | 67907 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 47 | NC_021432 | GAAA | 3 | 68174 | 68185 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 51194350 |
| 48 | NC_021432 | TCTT | 3 | 68792 | 68803 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 49 | NC_021432 | TTTC | 3 | 69365 | 69377 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 50 | NC_021432 | TGAT | 3 | 70015 | 70026 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 51 | NC_021432 | AATA | 3 | 70686 | 70696 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 51194344 |
| 52 | NC_021432 | TTTA | 3 | 70883 | 70894 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 51194344 |
| 53 | NC_021432 | AATA | 3 | 72363 | 72374 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 51194344 |
| 54 | NC_021432 | TATT | 3 | 77273 | 77283 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 51194344 |
| 55 | NC_021432 | ATTT | 3 | 77612 | 77622 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 51194344 |
| 56 | NC_021432 | AATG | 3 | 77967 | 77977 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51194344 |
| 57 | NC_021432 | AATC | 4 | 79194 | 79209 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | 51194344 |
| 58 | NC_021432 | TTTA | 3 | 81570 | 81580 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 51194344 |
| 59 | NC_021432 | ATTT | 6 | 83243 | 83264 | 22 | 25 % | 75 % | 0 % | 0 % | 9 % | 51194344 |
| 60 | NC_021432 | TTTA | 3 | 83401 | 83412 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 51194344 |
| 61 | NC_021432 | TTCT | 3 | 83469 | 83480 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 51194344 |
| 62 | NC_021432 | TTTC | 3 | 83705 | 83715 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 51194344 |
| 63 | NC_021432 | GCAA | 3 | 87970 | 87980 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 51194344 |
| 64 | NC_021432 | TTCT | 3 | 89244 | 89254 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 51194344 |
| 65 | NC_021432 | TGAT | 3 | 92214 | 92226 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 51194344 |
| 66 | NC_021432 | TTTC | 3 | 93165 | 93176 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 51194344 |
| 67 | NC_021432 | TCTA | 3 | 95314 | 95325 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51194344 |
| 68 | NC_021432 | TCTA | 3 | 104695 | 104706 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51194352 |
| 69 | NC_021432 | GAGG | 3 | 107525 | 107536 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 51194352 |
| 70 | NC_021432 | AGGT | 3 | 107737 | 107748 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 51194352 |
| 71 | NC_021432 | TAAG | 3 | 108857 | 108867 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51194352 |
| 72 | NC_021432 | ATTC | 3 | 110169 | 110179 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 51194352 |
| 73 | NC_021432 | ATGA | 3 | 110184 | 110194 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51194352 |
| 74 | NC_021432 | TAAA | 3 | 113164 | 113174 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 51194352 |
| 75 | NC_021432 | AAAT | 3 | 114753 | 114764 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 51194352 |
| 76 | NC_021432 | TAGA | 3 | 116788 | 116798 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51194352 |
| 77 | NC_021432 | AAAT | 3 | 118708 | 118720 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 51194352 |
| 78 | NC_021432 | TTGA | 3 | 119165 | 119176 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 51194352 |
| 79 | NC_021432 | ATAA | 3 | 120183 | 120194 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 51194352 |
| 80 | NC_021432 | CAAT | 3 | 120662 | 120672 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 51194352 |
| 81 | NC_021432 | AAGA | 3 | 121961 | 121972 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 51194352 |
| 82 | NC_021432 | AAGA | 3 | 124585 | 124596 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 51194352 |
| 83 | NC_021432 | TTAT | 3 | 126672 | 126683 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 51194352 |
| 84 | NC_021432 | TTTG | 3 | 126718 | 126729 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 51194352 |
| 85 | NC_021432 | GAAT | 3 | 126770 | 126781 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 51194352 |
| 86 | NC_021432 | CATT | 3 | 126932 | 126943 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51194352 |
| 87 | NC_021432 | AAAT | 3 | 127711 | 127721 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 51194352 |
| 88 | NC_021432 | CTTT | 4 | 129884 | 129899 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 51194352 |
| 89 | NC_021432 | ATGA | 3 | 131070 | 131081 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 51194352 |
| 90 | NC_021432 | CTTA | 3 | 132388 | 132398 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 51194352 |
| 91 | NC_021432 | TAGA | 3 | 145930 | 145941 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 92 | NC_021432 | TGAA | 3 | 148078 | 148089 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 51194344 |
| 93 | NC_021432 | ATCA | 3 | 149029 | 149041 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 51194344 |
| 94 | NC_021432 | TGAT | 3 | 149124 | 149136 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 51194344 |
| 95 | NC_021432 | ATTT | 3 | 151874 | 151885 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 51194344 |
| 96 | NC_021432 | AGAA | 3 | 152001 | 152011 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 51194344 |
| 97 | NC_021432 | TTGC | 3 | 153275 | 153285 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 51194344 |
| 98 | NC_021432 | CATT | 3 | 155738 | 155748 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |