Tetra-nucleotide Imperfect Repeats of Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_021431 | TAAA | 4 | 1384 | 1398 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 2 | NC_021431 | AATA | 3 | 1616 | 1626 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 3 | NC_021431 | ATGG | 3 | 2840 | 2852 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | 51272140 |
| 4 | NC_021431 | ATAA | 3 | 4739 | 4750 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 5 | NC_021431 | ATTT | 3 | 6587 | 6597 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_021431 | CTAT | 3 | 10060 | 10071 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 7 | NC_021431 | TAGA | 3 | 10283 | 10293 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51272141 |
| 8 | NC_021431 | GTCT | 3 | 11197 | 11208 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 51272141 |
| 9 | NC_021431 | AAAT | 3 | 12429 | 12439 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 51272141 |
| 10 | NC_021431 | AAAG | 3 | 12518 | 12528 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 51272141 |
| 11 | NC_021431 | CTTT | 3 | 12788 | 12798 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 51272141 |
| 12 | NC_021431 | ACTA | 3 | 14027 | 14038 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 13 | NC_021431 | TTTA | 3 | 16146 | 16156 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 14 | NC_021431 | TCAA | 3 | 16464 | 16475 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 51272140 |
| 15 | NC_021431 | TTCA | 3 | 22359 | 22370 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51272140 |
| 16 | NC_021431 | GAAA | 3 | 26039 | 26051 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 51272140 |
| 17 | NC_021431 | AGCT | 3 | 27261 | 27272 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 18 | NC_021431 | TCTA | 3 | 27344 | 27354 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 19 | NC_021431 | AAGT | 3 | 28483 | 28493 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 20 | NC_021431 | GAAA | 3 | 29143 | 29153 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 21 | NC_021431 | TATT | 3 | 29895 | 29906 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 22 | NC_021431 | AATT | 3 | 29910 | 29921 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 23 | NC_021431 | TTAA | 3 | 29922 | 29933 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 24 | NC_021431 | TCTT | 3 | 30652 | 30663 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 25 | NC_021431 | AGTA | 3 | 31006 | 31016 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 26 | NC_021431 | AAAG | 3 | 31127 | 31138 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 27 | NC_021431 | TAAA | 4 | 32239 | 32254 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 28 | NC_021431 | TTCT | 3 | 33797 | 33807 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 29 | NC_021431 | AGAA | 3 | 33895 | 33905 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 30 | NC_021431 | GAAA | 3 | 35501 | 35512 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 51272141 |
| 31 | NC_021431 | TTCT | 3 | 36509 | 36519 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 32 | NC_021431 | ACAA | 3 | 38328 | 38339 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 33 | NC_021431 | AAGA | 3 | 40820 | 40831 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 51272140 |
| 34 | NC_021431 | AATG | 3 | 41219 | 41230 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 51272140 |
| 35 | NC_021431 | TTTA | 3 | 42967 | 42978 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 36 | NC_021431 | TCTT | 3 | 44361 | 44372 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 51272140 |
| 37 | NC_021431 | ATTT | 6 | 47309 | 47330 | 22 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 38 | NC_021431 | CAAT | 3 | 47467 | 47478 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 39 | NC_021431 | TTGA | 3 | 47871 | 47883 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 40 | NC_021431 | TAAT | 3 | 55586 | 55596 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 41 | NC_021431 | AAAT | 3 | 59678 | 59689 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 51272141 |
| 42 | NC_021431 | AAAT | 3 | 59694 | 59704 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 43 | NC_021431 | TTAA | 3 | 60367 | 60378 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 44 | NC_021431 | GAAA | 3 | 63178 | 63190 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 51272142 |
| 45 | NC_021431 | GAAA | 3 | 68131 | 68142 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 51272145 |
| 46 | NC_021431 | TCTT | 3 | 68764 | 68775 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 47 | NC_021431 | TTTC | 3 | 69340 | 69352 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 48 | NC_021431 | AATA | 3 | 70668 | 70678 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 51272139 |
| 49 | NC_021431 | TTTA | 3 | 70865 | 70876 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 51272139 |
| 50 | NC_021431 | AAAG | 3 | 70979 | 70989 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 51272139 |
| 51 | NC_021431 | AATA | 3 | 72340 | 72351 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 51272139 |
| 52 | NC_021431 | TATT | 3 | 77265 | 77275 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 51272139 |
| 53 | NC_021431 | AATG | 3 | 77908 | 77918 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51272139 |
| 54 | NC_021431 | AATC | 4 | 79142 | 79157 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | 51272139 |
| 55 | NC_021431 | TTTA | 3 | 81517 | 81527 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 51272139 |
| 56 | NC_021431 | ATTT | 6 | 83244 | 83265 | 22 | 25 % | 75 % | 0 % | 0 % | 9 % | 51272139 |
| 57 | NC_021431 | TTCT | 3 | 83461 | 83472 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 51272139 |
| 58 | NC_021431 | TTGA | 3 | 83853 | 83864 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 51272139 |
| 59 | NC_021431 | GCAA | 3 | 88004 | 88014 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 51272139 |
| 60 | NC_021431 | TTCT | 3 | 89296 | 89306 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 51272139 |
| 61 | NC_021431 | TGAT | 3 | 92257 | 92269 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 51272139 |
| 62 | NC_021431 | TTTC | 3 | 93208 | 93219 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 51272139 |
| 63 | NC_021431 | TCTA | 3 | 95357 | 95368 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51272139 |
| 64 | NC_021431 | TCTA | 3 | 104701 | 104712 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51272147 |
| 65 | NC_021431 | GAGG | 3 | 107523 | 107534 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 51272147 |
| 66 | NC_021431 | AGGT | 3 | 107735 | 107746 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 51272147 |
| 67 | NC_021431 | TAAG | 3 | 108855 | 108865 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51272147 |
| 68 | NC_021431 | ATTC | 3 | 110149 | 110159 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 51272147 |
| 69 | NC_021431 | ATGA | 3 | 110164 | 110174 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51272147 |
| 70 | NC_021431 | TTCT | 3 | 113899 | 113910 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 51272147 |
| 71 | NC_021431 | AAAT | 3 | 114281 | 114292 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 51272147 |
| 72 | NC_021431 | TAGA | 3 | 116377 | 116387 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51272147 |
| 73 | NC_021431 | AAAT | 3 | 118180 | 118192 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 51272147 |
| 74 | NC_021431 | CAAT | 3 | 120157 | 120167 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 51272147 |
| 75 | NC_021431 | AAGA | 3 | 121455 | 121466 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 51272147 |
| 76 | NC_021431 | GAAA | 5 | 122065 | 122085 | 21 | 75 % | 0 % | 25 % | 0 % | 9 % | 51272147 |
| 77 | NC_021431 | AAGA | 3 | 123936 | 123947 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 51272147 |
| 78 | NC_021431 | TTTG | 3 | 126082 | 126093 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 51272147 |
| 79 | NC_021431 | GAAT | 3 | 126134 | 126145 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 51272147 |
| 80 | NC_021431 | CATT | 3 | 126296 | 126307 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51272147 |
| 81 | NC_021431 | CTTT | 4 | 129242 | 129257 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 51272147 |
| 82 | NC_021431 | ATGA | 3 | 130439 | 130450 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 51272147 |
| 83 | NC_021431 | CTTA | 3 | 131739 | 131749 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 51272147 |
| 84 | NC_021431 | TAGA | 3 | 140082 | 140092 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51272147 |
| 85 | NC_021431 | TAGA | 3 | 145236 | 145247 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 86 | NC_021431 | TGAA | 3 | 147384 | 147395 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 51272139 |
| 87 | NC_021431 | ATCA | 3 | 148335 | 148347 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 51272139 |
| 88 | NC_021431 | TGAT | 3 | 148430 | 148442 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 51272139 |
| 89 | NC_021431 | ATTT | 3 | 151171 | 151182 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 51272139 |
| 90 | NC_021431 | TTGC | 3 | 152590 | 152600 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 51272139 |
| 91 | NC_021431 | CATT | 3 | 155053 | 155063 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |