Tetra-nucleotide Imperfect Repeats of Cymbidium sinense voucher KUN:YJB100605 chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_021430 | TAAA | 4 | 1372 | 1386 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 2 | NC_021430 | AATA | 3 | 1588 | 1598 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 3 | NC_021430 | ATGG | 3 | 2812 | 2824 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | 51194334 |
| 4 | NC_021430 | TAAA | 3 | 4656 | 4667 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 5 | NC_021430 | ATTT | 3 | 6514 | 6524 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_021430 | CTAT | 3 | 9987 | 9998 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 7 | NC_021430 | TAGA | 3 | 10210 | 10220 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51194334 |
| 8 | NC_021430 | GTCT | 3 | 11124 | 11135 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 51194334 |
| 9 | NC_021430 | AAAT | 3 | 12356 | 12366 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 51194335 |
| 10 | NC_021430 | AAAG | 3 | 12445 | 12455 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 51194335 |
| 11 | NC_021430 | CTTT | 3 | 12715 | 12725 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 51194335 |
| 12 | NC_021430 | ACTA | 3 | 13953 | 13964 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 13 | NC_021430 | TTTA | 3 | 16071 | 16081 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 14 | NC_021430 | TCAA | 3 | 16389 | 16400 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 51194333 |
| 15 | NC_021430 | TTCA | 3 | 22284 | 22295 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51194334 |
| 16 | NC_021430 | GAAA | 3 | 25964 | 25976 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 51194334 |
| 17 | NC_021430 | AGCT | 3 | 27186 | 27197 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 18 | NC_021430 | TCTA | 3 | 27269 | 27279 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 19 | NC_021430 | AAGT | 3 | 28399 | 28409 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 20 | NC_021430 | GAAA | 3 | 29073 | 29083 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 21 | NC_021430 | TATT | 3 | 29825 | 29836 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 22 | NC_021430 | AATT | 3 | 29840 | 29851 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 23 | NC_021430 | TTAA | 3 | 29852 | 29863 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 24 | NC_021430 | TCTT | 3 | 30582 | 30593 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 25 | NC_021430 | AAAG | 3 | 31057 | 31068 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 26 | NC_021430 | TAAA | 4 | 32141 | 32156 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 27 | NC_021430 | TTCT | 3 | 33699 | 33709 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 28 | NC_021430 | GAAA | 3 | 35403 | 35414 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 51194335 |
| 29 | NC_021430 | TTCT | 3 | 36411 | 36421 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 30 | NC_021430 | ACAA | 3 | 38230 | 38241 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 31 | NC_021430 | AAGA | 3 | 40722 | 40733 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 51194334 |
| 32 | NC_021430 | AATG | 3 | 41121 | 41132 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 51194334 |
| 33 | NC_021430 | TTTA | 3 | 42869 | 42880 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_021430 | TCTT | 3 | 44263 | 44274 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 51194334 |
| 35 | NC_021430 | CAAT | 3 | 47358 | 47369 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 36 | NC_021430 | TTGA | 3 | 47763 | 47775 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 37 | NC_021430 | TCTT | 4 | 48708 | 48723 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 38 | NC_021430 | TAAT | 3 | 55483 | 55493 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 39 | NC_021430 | AAAT | 3 | 59561 | 59572 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 51194335 |
| 40 | NC_021430 | AAAT | 3 | 59577 | 59587 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 41 | NC_021430 | TTAA | 3 | 60296 | 60307 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 42 | NC_021430 | GAAA | 3 | 63118 | 63130 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 51194336 |
| 43 | NC_021430 | ATTA | 6 | 67556 | 67578 | 23 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 44 | NC_021430 | GAAA | 3 | 68088 | 68099 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 51194339 |
| 45 | NC_021430 | TCTT | 3 | 68721 | 68732 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 46 | NC_021430 | TTTC | 3 | 69296 | 69308 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 47 | NC_021430 | AATA | 3 | 70624 | 70634 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 51194333 |
| 48 | NC_021430 | TTTA | 3 | 70821 | 70832 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 51194333 |
| 49 | NC_021430 | AAAG | 3 | 70935 | 70945 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 51194333 |
| 50 | NC_021430 | AATA | 3 | 72294 | 72305 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 51194333 |
| 51 | NC_021430 | TATT | 3 | 77219 | 77229 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 51194333 |
| 52 | NC_021430 | AATG | 3 | 77862 | 77872 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51194333 |
| 53 | NC_021430 | AATC | 4 | 79089 | 79104 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | 51194333 |
| 54 | NC_021430 | TTTA | 3 | 81463 | 81473 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 51194333 |
| 55 | NC_021430 | ATTT | 6 | 83190 | 83211 | 22 | 25 % | 75 % | 0 % | 0 % | 9 % | 51194333 |
| 56 | NC_021430 | TTCT | 3 | 83407 | 83418 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 51194333 |
| 57 | NC_021430 | TTGA | 3 | 83797 | 83808 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 51194333 |
| 58 | NC_021430 | GCAA | 3 | 87948 | 87958 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 51194333 |
| 59 | NC_021430 | TTCT | 3 | 89240 | 89250 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 51194333 |
| 60 | NC_021430 | TGAT | 3 | 92210 | 92222 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 51194333 |
| 61 | NC_021430 | TTTC | 3 | 93161 | 93172 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 51194333 |
| 62 | NC_021430 | TCTA | 3 | 95310 | 95321 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51194333 |
| 63 | NC_021430 | TCTA | 3 | 104653 | 104664 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51194341 |
| 64 | NC_021430 | GAGG | 3 | 107475 | 107486 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 51194341 |
| 65 | NC_021430 | AGGT | 3 | 107687 | 107698 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 51194341 |
| 66 | NC_021430 | TAAG | 3 | 108807 | 108817 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51194341 |
| 67 | NC_021430 | ATTC | 3 | 110101 | 110111 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 51194341 |
| 68 | NC_021430 | ATGA | 3 | 110116 | 110126 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51194341 |
| 69 | NC_021430 | TTCT | 3 | 113848 | 113859 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 51194341 |
| 70 | NC_021430 | AAAT | 3 | 114201 | 114212 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 51194341 |
| 71 | NC_021430 | TAGA | 3 | 116298 | 116308 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51194341 |
| 72 | NC_021430 | AAAT | 3 | 118092 | 118104 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 51194341 |
| 73 | NC_021430 | ATAA | 3 | 119593 | 119604 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 51194341 |
| 74 | NC_021430 | CAAT | 3 | 120069 | 120079 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 51194341 |
| 75 | NC_021430 | AAGA | 3 | 121367 | 121378 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 51194341 |
| 76 | NC_021430 | GAAA | 5 | 121977 | 121997 | 21 | 75 % | 0 % | 25 % | 0 % | 9 % | 51194341 |
| 77 | NC_021430 | AAGA | 3 | 123849 | 123860 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 51194341 |
| 78 | NC_021430 | TTTG | 3 | 125995 | 126006 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 51194341 |
| 79 | NC_021430 | GAAT | 3 | 126047 | 126058 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 51194341 |
| 80 | NC_021430 | CATT | 3 | 126209 | 126220 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 51194341 |
| 81 | NC_021430 | CTTT | 4 | 129155 | 129170 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 51194341 |
| 82 | NC_021430 | ATGA | 3 | 130352 | 130363 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 51194341 |
| 83 | NC_021430 | CTTA | 3 | 131652 | 131662 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 51194341 |
| 84 | NC_021430 | TAGA | 3 | 139994 | 140004 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 51194341 |
| 85 | NC_021430 | TAGA | 3 | 145148 | 145159 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 86 | NC_021430 | TGAA | 3 | 147296 | 147307 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 51194333 |
| 87 | NC_021430 | ATCA | 3 | 148247 | 148259 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 51194333 |
| 88 | NC_021430 | TGAT | 3 | 148342 | 148354 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 51194333 |
| 89 | NC_021430 | ATTT | 3 | 151092 | 151103 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 51194333 |
| 90 | NC_021430 | TTGC | 3 | 152511 | 152521 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 51194333 |
| 91 | NC_021430 | CATT | 3 | 154974 | 154984 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |