Tetra-nucleotide Imperfect Repeats of Pyropia haitanensis voucher PH-38 chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_021189 | TCTT | 3 | 3316 | 3326 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 50100011 |
| 2 | NC_021189 | TATT | 3 | 4376 | 4386 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50100011 |
| 3 | NC_021189 | TATC | 3 | 6209 | 6219 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 50100012 |
| 4 | NC_021189 | TAAA | 3 | 6524 | 6535 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 50100012 |
| 5 | NC_021189 | AATT | 3 | 7170 | 7182 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 6 | NC_021189 | AATT | 3 | 14133 | 14144 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 50100013 |
| 7 | NC_021189 | TGAT | 3 | 15139 | 15149 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 50100013 |
| 8 | NC_021189 | TTAT | 3 | 16243 | 16253 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_021189 | TGAT | 3 | 22519 | 22529 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 50100014 |
| 10 | NC_021189 | TTAA | 3 | 24373 | 24384 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 11 | NC_021189 | ATTT | 3 | 25379 | 25389 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50100014 |
| 12 | NC_021189 | ATGA | 3 | 25868 | 25879 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 50100014 |
| 13 | NC_021189 | TTAT | 3 | 28831 | 28842 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50100015 |
| 14 | NC_021189 | TTCC | 3 | 31065 | 31076 | 12 | 0 % | 50 % | 0 % | 50 % | 0 % | 50100015 |
| 15 | NC_021189 | TTAA | 3 | 31684 | 31695 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 50100015 |
| 16 | NC_021189 | AAGA | 3 | 34001 | 34011 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 50100015 |
| 17 | NC_021189 | AAAC | 3 | 34690 | 34701 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 50100016 |
| 18 | NC_021189 | CTAT | 3 | 37320 | 37331 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 50100016 |
| 19 | NC_021189 | AGTT | 3 | 38170 | 38180 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 20 | NC_021189 | TTTA | 3 | 38446 | 38456 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50100016 |
| 21 | NC_021189 | TTAA | 3 | 47792 | 47803 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 22 | NC_021189 | AATT | 3 | 55191 | 55202 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 23 | NC_021189 | TTTA | 3 | 58642 | 58652 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50100018 |
| 24 | NC_021189 | TGTC | 3 | 58890 | 58901 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | Non-Coding |
| 25 | NC_021189 | AAAT | 3 | 59268 | 59279 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 26 | NC_021189 | ATTA | 3 | 60061 | 60072 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 50100018 |
| 27 | NC_021189 | TTAA | 3 | 61178 | 61188 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 50100018 |
| 28 | NC_021189 | TTAA | 3 | 65337 | 65349 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 50100018 |
| 29 | NC_021189 | TATT | 3 | 65812 | 65823 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_021189 | CATC | 3 | 73799 | 73811 | 13 | 25 % | 25 % | 0 % | 50 % | 7 % | 50100019 |
| 31 | NC_021189 | TCTG | 3 | 77641 | 77652 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 50100020 |
| 32 | NC_021189 | TAAA | 3 | 78148 | 78159 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_021189 | TATT | 3 | 78238 | 78248 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50100020 |
| 34 | NC_021189 | TTTA | 3 | 80104 | 80114 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50100020 |
| 35 | NC_021189 | AAAT | 3 | 82079 | 82090 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 50100020 |
| 36 | NC_021189 | AAAT | 3 | 82398 | 82408 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 37 | NC_021189 | ATTT | 3 | 83808 | 83818 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50100020 |
| 38 | NC_021189 | AATT | 3 | 90932 | 90944 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 39 | NC_021189 | TTAA | 3 | 91004 | 91014 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 50100021 |
| 40 | NC_021189 | CTTT | 3 | 94959 | 94969 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 50100022 |
| 41 | NC_021189 | TGTC | 3 | 99887 | 99898 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 50100022 |
| 42 | NC_021189 | CAAT | 3 | 102658 | 102668 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 50100023 |
| 43 | NC_021189 | AATC | 3 | 104579 | 104590 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 50100023 |
| 44 | NC_021189 | ATTT | 3 | 105398 | 105408 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50100024 |
| 45 | NC_021189 | AAAG | 3 | 108433 | 108443 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 50100024 |
| 46 | NC_021189 | AAAC | 3 | 108908 | 108919 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 47 | NC_021189 | GCAA | 3 | 109603 | 109613 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 50100024 |
| 48 | NC_021189 | TTAA | 3 | 115202 | 115212 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 49 | NC_021189 | TAAA | 3 | 116089 | 116100 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 50 | NC_021189 | TTAA | 3 | 130315 | 130327 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 51 | NC_021189 | AATA | 3 | 130344 | 130354 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 52 | NC_021189 | TAAA | 3 | 131076 | 131087 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 50100026 |
| 53 | NC_021189 | AATA | 3 | 133237 | 133247 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 50100027 |
| 54 | NC_021189 | TATC | 3 | 136647 | 136657 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 50100027 |
| 55 | NC_021189 | ATTT | 3 | 139174 | 139185 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 56 | NC_021189 | TTCA | 3 | 139790 | 139801 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 57 | NC_021189 | ATTT | 3 | 141886 | 141897 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50100027 |
| 58 | NC_021189 | AAAT | 3 | 142524 | 142534 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 59 | NC_021189 | TAAG | 3 | 144915 | 144925 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 50100028 |
| 60 | NC_021189 | TAAA | 3 | 149268 | 149279 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 61 | NC_021189 | AAAT | 3 | 155212 | 155224 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 62 | NC_021189 | ACAA | 3 | 157718 | 157728 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 50100029 |
| 63 | NC_021189 | TTTA | 3 | 159263 | 159274 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 64 | NC_021189 | TTAT | 3 | 159428 | 159439 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 65 | NC_021189 | AGAT | 3 | 160443 | 160454 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 50100029 |
| 66 | NC_021189 | TTTA | 3 | 171206 | 171216 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50100030 |
| 67 | NC_021189 | TATT | 3 | 172753 | 172764 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 68 | NC_021189 | ATTA | 3 | 175771 | 175781 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 50100030 |
| 69 | NC_021189 | TTAA | 3 | 176009 | 176019 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 50100030 |
| 70 | NC_021189 | TAAA | 3 | 176331 | 176341 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 50100030 |
| 71 | NC_021189 | AATA | 3 | 176386 | 176397 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 50100030 |
| 72 | NC_021189 | AACT | 3 | 177997 | 178007 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 50100031 |
| 73 | NC_021189 | GGCG | 3 | 178531 | 178543 | 13 | 0 % | 0 % | 75 % | 25 % | 7 % | 50100031 |
| 74 | NC_021189 | TTTA | 3 | 179232 | 179244 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 50100031 |
| 75 | NC_021189 | TGTA | 3 | 179979 | 179989 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 50100031 |
| 76 | NC_021189 | TTTA | 3 | 182668 | 182678 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 77 | NC_021189 | CTAT | 3 | 184565 | 184577 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 78 | NC_021189 | TTTG | 3 | 187387 | 187398 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 50100032 |
| 79 | NC_021189 | TACA | 3 | 188224 | 188234 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 50100032 |
| 80 | NC_021189 | TTGT | 3 | 190126 | 190137 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 50100032 |