Tri-nucleotide Imperfect Repeats of Pyropia haitanensis voucher PH-38 chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_021189 | AGA | 4 | 1300 | 1311 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 50100011 |
2 | NC_021189 | TCT | 4 | 3866 | 3876 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 50100011 |
3 | NC_021189 | AAT | 4 | 4629 | 4639 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 50100011 |
4 | NC_021189 | TGA | 4 | 6707 | 6718 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 50100012 |
5 | NC_021189 | AGT | 4 | 7978 | 7989 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 50100012 |
6 | NC_021189 | AAT | 4 | 8578 | 8589 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
7 | NC_021189 | ATA | 4 | 16548 | 16558 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 50100013 |
8 | NC_021189 | AAT | 4 | 17316 | 17327 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 50100013 |
9 | NC_021189 | TCT | 4 | 20163 | 20174 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 50100013 |
10 | NC_021189 | CTG | 7 | 20425 | 20445 | 21 | 0 % | 33.33 % | 33.33 % | 33.33 % | 4 % | 50100013 |
11 | NC_021189 | TAT | 4 | 21051 | 21061 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 50100014 |
12 | NC_021189 | ATA | 4 | 21114 | 21125 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 50100014 |
13 | NC_021189 | TAT | 7 | 27505 | 27525 | 21 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 50100014 |
14 | NC_021189 | TTA | 4 | 29094 | 29105 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 50100015 |
15 | NC_021189 | CTG | 4 | 30195 | 30206 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 0 % | 50100015 |
16 | NC_021189 | ATT | 4 | 31271 | 31281 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 50100015 |
17 | NC_021189 | ATT | 4 | 34487 | 34499 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 50100016 |
18 | NC_021189 | ATA | 5 | 35135 | 35148 | 14 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 50100016 |
19 | NC_021189 | AAT | 4 | 35424 | 35434 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 50100016 |
20 | NC_021189 | ATA | 5 | 36969 | 36983 | 15 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | 50100016 |
21 | NC_021189 | ATT | 4 | 37675 | 37686 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 50100016 |
22 | NC_021189 | TAA | 4 | 42058 | 42069 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 50100016 |
23 | NC_021189 | TAG | 4 | 43002 | 43012 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 50100016 |
24 | NC_021189 | ATA | 4 | 59844 | 59856 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
25 | NC_021189 | ATA | 4 | 59861 | 59871 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
26 | NC_021189 | ATA | 4 | 61862 | 61873 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 0 % | 50100018 |
27 | NC_021189 | TCA | 4 | 62567 | 62578 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 50100018 |
28 | NC_021189 | TGC | 4 | 69644 | 69654 | 11 | 0 % | 33.33 % | 33.33 % | 33.33 % | 9 % | 50100019 |
29 | NC_021189 | TAT | 5 | 70784 | 70797 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 50100019 |
30 | NC_021189 | CTT | 4 | 73652 | 73663 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 50100019 |
31 | NC_021189 | ATT | 4 | 74732 | 74743 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
32 | NC_021189 | ATC | 4 | 74787 | 74797 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 50100019 |
33 | NC_021189 | ATT | 4 | 76598 | 76609 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 50100019 |
34 | NC_021189 | AGT | 4 | 78531 | 78541 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 50100020 |
35 | NC_021189 | TTA | 4 | 79009 | 79019 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
36 | NC_021189 | TTA | 4 | 79138 | 79148 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
37 | NC_021189 | TAT | 4 | 79147 | 79158 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
38 | NC_021189 | AGA | 4 | 82698 | 82709 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 50100020 |
39 | NC_021189 | TAA | 4 | 85993 | 86004 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 50100021 |
40 | NC_021189 | TCA | 4 | 87320 | 87331 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 50100021 |
41 | NC_021189 | TAA | 4 | 88550 | 88560 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 50100021 |
42 | NC_021189 | AAT | 4 | 89928 | 89939 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 50100021 |
43 | NC_021189 | TAC | 4 | 90301 | 90313 | 13 | 33.33 % | 33.33 % | 0 % | 33.33 % | 7 % | 50100021 |
44 | NC_021189 | TCC | 4 | 94069 | 94080 | 12 | 0 % | 33.33 % | 0 % | 66.67 % | 8 % | 50100021 |
45 | NC_021189 | CTT | 4 | 95344 | 95355 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 50100022 |
46 | NC_021189 | CTA | 4 | 95524 | 95535 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 50100022 |
47 | NC_021189 | CTT | 4 | 96423 | 96434 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 50100022 |
48 | NC_021189 | TTC | 4 | 97578 | 97589 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 50100022 |
49 | NC_021189 | CTT | 4 | 100110 | 100120 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 50100022 |
50 | NC_021189 | CTA | 4 | 101762 | 101772 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 50100023 |
51 | NC_021189 | GCA | 4 | 103440 | 103450 | 11 | 33.33 % | 0 % | 33.33 % | 33.33 % | 9 % | 50100023 |
52 | NC_021189 | ATA | 4 | 103914 | 103924 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 50100023 |
53 | NC_021189 | TAA | 4 | 103937 | 103947 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 50100023 |
54 | NC_021189 | CAC | 4 | 104072 | 104083 | 12 | 33.33 % | 0 % | 0 % | 66.67 % | 8 % | 50100023 |
55 | NC_021189 | CAC | 4 | 105488 | 105499 | 12 | 33.33 % | 0 % | 0 % | 66.67 % | 8 % | 50100024 |
56 | NC_021189 | TTA | 4 | 106599 | 106609 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
57 | NC_021189 | TAT | 4 | 109446 | 109458 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
58 | NC_021189 | TCA | 4 | 110333 | 110344 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | Non-Coding |
59 | NC_021189 | CTT | 4 | 111757 | 111768 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 50100024 |
60 | NC_021189 | TAA | 4 | 111894 | 111904 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
61 | NC_021189 | ATT | 4 | 112962 | 112974 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 50100025 |
62 | NC_021189 | TAG | 4 | 113088 | 113099 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | Non-Coding |
63 | NC_021189 | ATT | 4 | 115587 | 115598 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 50100025 |
64 | NC_021189 | GAA | 4 | 117296 | 117308 | 13 | 66.67 % | 0 % | 33.33 % | 0 % | 7 % | 50100025 |
65 | NC_021189 | GCT | 4 | 119243 | 119254 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 50100025 |
66 | NC_021189 | TCA | 4 | 120076 | 120086 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 50100025 |
67 | NC_021189 | AGG | 4 | 120945 | 120956 | 12 | 33.33 % | 0 % | 66.67 % | 0 % | 8 % | 50100025 |
68 | NC_021189 | ATT | 5 | 121705 | 121719 | 15 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | 50100025 |
69 | NC_021189 | TCT | 4 | 122712 | 122723 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 50100026 |
70 | NC_021189 | CAA | 4 | 123275 | 123285 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | Non-Coding |
71 | NC_021189 | TCT | 4 | 125261 | 125272 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 50100026 |
72 | NC_021189 | ATT | 4 | 126982 | 126994 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 50100026 |
73 | NC_021189 | CCA | 4 | 129567 | 129578 | 12 | 33.33 % | 0 % | 0 % | 66.67 % | 8 % | 50100026 |
74 | NC_021189 | ATT | 4 | 130858 | 130869 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
75 | NC_021189 | ATT | 4 | 133414 | 133424 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
76 | NC_021189 | TAC | 4 | 133570 | 133580 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 50100027 |
77 | NC_021189 | TAA | 5 | 133666 | 133680 | 15 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | 50100027 |
78 | NC_021189 | ATA | 4 | 135030 | 135041 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 50100027 |
79 | NC_021189 | TAT | 5 | 137019 | 137033 | 15 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | 50100027 |
80 | NC_021189 | TTG | 4 | 140877 | 140889 | 13 | 0 % | 66.67 % | 33.33 % | 0 % | 7 % | 50100027 |
81 | NC_021189 | AAC | 4 | 142805 | 142816 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 50100027 |
82 | NC_021189 | AGT | 4 | 143936 | 143947 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 50100027 |
83 | NC_021189 | TAT | 4 | 144703 | 144713 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 50100028 |
84 | NC_021189 | TTA | 4 | 146542 | 146553 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 50100028 |
85 | NC_021189 | CAG | 4 | 146724 | 146735 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 50100028 |
86 | NC_021189 | CAT | 4 | 149837 | 149847 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 50100028 |
87 | NC_021189 | CAA | 4 | 149980 | 149991 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 50100028 |
88 | NC_021189 | TAA | 4 | 156409 | 156420 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 50100029 |
89 | NC_021189 | TAA | 4 | 158112 | 158122 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 50100029 |
90 | NC_021189 | TAT | 4 | 158253 | 158263 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 50100029 |
91 | NC_021189 | TAT | 5 | 158298 | 158313 | 16 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | 50100029 |
92 | NC_021189 | ATA | 4 | 159207 | 159217 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
93 | NC_021189 | TGT | 4 | 159399 | 159410 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | Non-Coding |
94 | NC_021189 | ATA | 4 | 160328 | 160339 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 50100029 |
95 | NC_021189 | TTC | 4 | 161110 | 161121 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 50100029 |
96 | NC_021189 | AGC | 4 | 162639 | 162650 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 50100029 |
97 | NC_021189 | TAC | 4 | 162854 | 162865 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 50100029 |
98 | NC_021189 | CAG | 4 | 165112 | 165123 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 50100030 |
99 | NC_021189 | ATA | 4 | 167761 | 167772 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 50100030 |
100 | NC_021189 | ATT | 4 | 168767 | 168778 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 50100030 |
101 | NC_021189 | GAG | 4 | 169432 | 169443 | 12 | 33.33 % | 0 % | 66.67 % | 0 % | 8 % | 50100030 |
102 | NC_021189 | TAT | 4 | 172706 | 172716 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
103 | NC_021189 | AGC | 4 | 173871 | 173883 | 13 | 33.33 % | 0 % | 33.33 % | 33.33 % | 7 % | 50100030 |
104 | NC_021189 | ATT | 4 | 181121 | 181132 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 50100031 |
105 | NC_021189 | AAT | 4 | 188485 | 188496 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 50100032 |
106 | NC_021189 | TTC | 4 | 189095 | 189106 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 50100032 |
107 | NC_021189 | TAA | 4 | 195451 | 195461 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |