Tetra-nucleotide Imperfect Repeats of Cephalotaxus oliveri chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_021110 | TAAA | 3 | 679 | 690 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 2 | NC_021110 | TAAG | 3 | 4037 | 4047 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 50159508 |
| 3 | NC_021110 | AGAC | 3 | 4560 | 4570 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 50159508 |
| 4 | NC_021110 | TTCT | 3 | 4723 | 4733 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 5 | NC_021110 | TTTC | 3 | 7505 | 7516 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 50159503 |
| 6 | NC_021110 | CTAT | 3 | 8029 | 8039 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 7 | NC_021110 | GATC | 3 | 8123 | 8133 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 50159503 |
| 8 | NC_021110 | ATTT | 3 | 10292 | 10302 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_021110 | AAAG | 3 | 11941 | 11951 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 10 | NC_021110 | AATA | 3 | 12219 | 12230 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 11 | NC_021110 | TTTG | 3 | 12381 | 12392 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 50159508 |
| 12 | NC_021110 | TTGT | 3 | 12922 | 12933 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 13 | NC_021110 | ACAT | 3 | 13275 | 13286 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 14 | NC_021110 | AATA | 3 | 15744 | 15755 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 50159504 |
| 15 | NC_021110 | GCAT | 3 | 16667 | 16677 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 50159508 |
| 16 | NC_021110 | TAGA | 3 | 17485 | 17495 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 17 | NC_021110 | TTTA | 3 | 18171 | 18182 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50159511 |
| 18 | NC_021110 | GTTG | 3 | 18639 | 18651 | 13 | 0 % | 50 % | 50 % | 0 % | 7 % | 50159511 |
| 19 | NC_021110 | AATT | 3 | 19771 | 19781 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 50159511 |
| 20 | NC_021110 | TCTT | 3 | 20397 | 20408 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 50159511 |
| 21 | NC_021110 | TTTC | 3 | 20427 | 20438 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 50159511 |
| 22 | NC_021110 | TTAT | 3 | 20902 | 20912 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50159511 |
| 23 | NC_021110 | ATTT | 3 | 27802 | 27813 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50159511 |
| 24 | NC_021110 | TATT | 3 | 27852 | 27863 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50159511 |
| 25 | NC_021110 | TTTA | 3 | 29617 | 29627 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50159511 |
| 26 | NC_021110 | TCGA | 3 | 30632 | 30643 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 50159511 |
| 27 | NC_021110 | TCAA | 3 | 31656 | 31667 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 50159511 |
| 28 | NC_021110 | TAAT | 3 | 33521 | 33533 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 50159511 |
| 29 | NC_021110 | TTAA | 3 | 34335 | 34346 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 50159511 |
| 30 | NC_021110 | ATTT | 3 | 34402 | 34413 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50159511 |
| 31 | NC_021110 | TCAA | 3 | 35591 | 35602 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 50159511 |
| 32 | NC_021110 | GATT | 3 | 37191 | 37202 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 50159511 |
| 33 | NC_021110 | TTTA | 3 | 37206 | 37216 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50159511 |
| 34 | NC_021110 | TTGA | 4 | 41826 | 41840 | 15 | 25 % | 50 % | 25 % | 0 % | 6 % | 50159511 |
| 35 | NC_021110 | ATAA | 3 | 43740 | 43751 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 50159511 |
| 36 | NC_021110 | GTTT | 3 | 44264 | 44274 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 50159511 |
| 37 | NC_021110 | TATT | 3 | 44970 | 44981 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50159511 |
| 38 | NC_021110 | AATT | 3 | 46243 | 46253 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 50159511 |
| 39 | NC_021110 | ATTT | 3 | 48142 | 48152 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50159511 |
| 40 | NC_021110 | TAGT | 3 | 48484 | 48494 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 50159511 |
| 41 | NC_021110 | ATAA | 3 | 48585 | 48595 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 50159511 |
| 42 | NC_021110 | ATAG | 3 | 49106 | 49117 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 50159511 |
| 43 | NC_021110 | TCAT | 3 | 49410 | 49421 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 50159511 |
| 44 | NC_021110 | TCTT | 3 | 54630 | 54641 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 50159511 |
| 45 | NC_021110 | ATTT | 3 | 60549 | 60560 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50159511 |
| 46 | NC_021110 | AAAT | 3 | 61641 | 61651 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 50159511 |
| 47 | NC_021110 | TTCC | 3 | 61803 | 61814 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | 50159511 |
| 48 | NC_021110 | ATTT | 3 | 63241 | 63251 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50159511 |
| 49 | NC_021110 | TTAA | 3 | 67995 | 68005 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 50159511 |
| 50 | NC_021110 | TTTC | 3 | 68141 | 68152 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 50159511 |
| 51 | NC_021110 | CATA | 3 | 71414 | 71425 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 50159511 |
| 52 | NC_021110 | TCTA | 3 | 73923 | 73933 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 50159511 |
| 53 | NC_021110 | ATGG | 3 | 74736 | 74747 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 50159511 |
| 54 | NC_021110 | ATCC | 3 | 74754 | 74766 | 13 | 25 % | 25 % | 0 % | 50 % | 7 % | 50159511 |
| 55 | NC_021110 | ATTC | 3 | 75782 | 75793 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 50159511 |
| 56 | NC_021110 | AATA | 3 | 75878 | 75889 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 50159511 |
| 57 | NC_021110 | ATTA | 3 | 75977 | 75988 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 50159511 |
| 58 | NC_021110 | ATCC | 3 | 76073 | 76085 | 13 | 25 % | 25 % | 0 % | 50 % | 7 % | 50159511 |
| 59 | NC_021110 | GATA | 3 | 83175 | 83186 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 50159511 |
| 60 | NC_021110 | TTAA | 3 | 86289 | 86301 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 50159511 |
| 61 | NC_021110 | TAAA | 3 | 86393 | 86404 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 50159511 |
| 62 | NC_021110 | GAAA | 3 | 87387 | 87398 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 50159511 |
| 63 | NC_021110 | AGAA | 4 | 87757 | 87773 | 17 | 75 % | 0 % | 25 % | 0 % | 5 % | 50159511 |
| 64 | NC_021110 | ACAA | 4 | 87841 | 87856 | 16 | 75 % | 0 % | 0 % | 25 % | 6 % | 50159511 |
| 65 | NC_021110 | AAAG | 3 | 88133 | 88143 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 50159511 |
| 66 | NC_021110 | GAAA | 3 | 88297 | 88308 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 50159511 |
| 67 | NC_021110 | GAAA | 3 | 88345 | 88356 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 50159511 |
| 68 | NC_021110 | GTAC | 3 | 89250 | 89261 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 50159511 |
| 69 | NC_021110 | TTTA | 4 | 89765 | 89780 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 50159511 |
| 70 | NC_021110 | TTCT | 3 | 90092 | 90102 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 50159511 |
| 71 | NC_021110 | GTCC | 3 | 90162 | 90173 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | 50159511 |
| 72 | NC_021110 | ATTC | 3 | 92313 | 92323 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 50159511 |
| 73 | NC_021110 | TATT | 3 | 96107 | 96118 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50159511 |
| 74 | NC_021110 | TAAT | 3 | 96167 | 96178 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 50159511 |
| 75 | NC_021110 | TTAT | 3 | 99483 | 99494 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50159511 |
| 76 | NC_021110 | CCCA | 3 | 100247 | 100259 | 13 | 25 % | 0 % | 0 % | 75 % | 7 % | 50159511 |
| 77 | NC_021110 | TTTC | 3 | 101306 | 101317 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 50159511 |
| 78 | NC_021110 | TAGT | 3 | 101562 | 101572 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 50159511 |
| 79 | NC_021110 | AATG | 3 | 103854 | 103864 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 50159511 |
| 80 | NC_021110 | ACTT | 3 | 105588 | 105598 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 50159511 |
| 81 | NC_021110 | CTAC | 3 | 106710 | 106721 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 50159511 |
| 82 | NC_021110 | AATT | 3 | 111340 | 111351 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 50159511 |
| 83 | NC_021110 | TTAA | 3 | 111422 | 111432 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 50159511 |
| 84 | NC_021110 | TTAA | 3 | 111441 | 111452 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 50159511 |
| 85 | NC_021110 | ATTT | 3 | 114401 | 114411 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50159511 |
| 86 | NC_021110 | TTTA | 3 | 115129 | 115140 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50159511 |
| 87 | NC_021110 | TATT | 3 | 118897 | 118908 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 88 | NC_021110 | AATT | 3 | 123863 | 123874 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 50159511 |
| 89 | NC_021110 | AATT | 3 | 128244 | 128254 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 50159507 |
| 90 | NC_021110 | ATTG | 3 | 130973 | 130983 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 50159507 |
| 91 | NC_021110 | CATT | 3 | 131742 | 131754 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 50159507 |