Tetra-nucleotide Imperfect Repeats of Francoa sonchifolia plastid
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_021101 | AAGT | 3 | 1136 | 1146 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 50177083 |
| 2 | NC_021101 | TGAA | 4 | 1680 | 1696 | 17 | 50 % | 25 % | 25 % | 0 % | 5 % | Non-Coding |
| 3 | NC_021101 | TCAA | 3 | 1942 | 1953 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 4 | NC_021101 | AAAT | 3 | 3844 | 3854 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 5 | NC_021101 | AAAT | 4 | 4394 | 4409 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 6 | NC_021101 | TAGA | 3 | 4711 | 4722 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 7 | NC_021101 | TTTA | 3 | 4838 | 4849 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_021101 | TTCA | 3 | 5133 | 5144 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 9 | NC_021101 | TGAA | 3 | 6568 | 6578 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 10 | NC_021101 | TTTC | 3 | 7376 | 7386 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 50177083 |
| 11 | NC_021101 | GTTT | 3 | 7956 | 7966 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 12 | NC_021101 | CTTT | 3 | 8421 | 8432 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 13 | NC_021101 | TTAG | 3 | 8672 | 8682 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 14 | NC_021101 | AATT | 3 | 9630 | 9641 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 15 | NC_021101 | CCTT | 3 | 12399 | 12410 | 12 | 0 % | 50 % | 0 % | 50 % | 0 % | 50177084 |
| 16 | NC_021101 | ATTT | 3 | 12663 | 12674 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50177084 |
| 17 | NC_021101 | AAAT | 3 | 13593 | 13604 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 18 | NC_021101 | TTCT | 3 | 17795 | 17806 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 50177084 |
| 19 | NC_021101 | TTCA | 3 | 22593 | 22604 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 50177084 |
| 20 | NC_021101 | CATT | 3 | 26813 | 26824 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 50177084 |
| 21 | NC_021101 | TGAT | 3 | 30654 | 30665 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 22 | NC_021101 | AATT | 3 | 31440 | 31451 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 23 | NC_021101 | GAAA | 3 | 34830 | 34841 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 50177085 |
| 24 | NC_021101 | TTGC | 3 | 35231 | 35241 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 50177085 |
| 25 | NC_021101 | AAAT | 4 | 36320 | 36335 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 26 | NC_021101 | TAAA | 3 | 36942 | 36954 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 27 | NC_021101 | CCCA | 3 | 37248 | 37258 | 11 | 25 % | 0 % | 0 % | 75 % | 9 % | Non-Coding |
| 28 | NC_021101 | AATG | 3 | 40810 | 40821 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 50177085 |
| 29 | NC_021101 | GTCA | 3 | 42815 | 42825 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 30 | NC_021101 | AAAT | 3 | 43093 | 43103 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 31 | NC_021101 | TTTA | 3 | 43898 | 43909 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 50177085 |
| 32 | NC_021101 | TTTA | 3 | 44889 | 44900 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 50177085 |
| 33 | NC_021101 | CTTT | 3 | 44949 | 44959 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 50177085 |
| 34 | NC_021101 | AAAT | 3 | 47451 | 47462 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 35 | NC_021101 | ATCA | 3 | 47684 | 47694 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 36 | NC_021101 | TTTC | 3 | 47732 | 47743 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 37 | NC_021101 | ATTT | 3 | 47744 | 47755 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 38 | NC_021101 | TGCA | 3 | 49913 | 49923 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 39 | NC_021101 | GTTT | 3 | 51958 | 51970 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 40 | NC_021101 | AACC | 3 | 52984 | 52995 | 12 | 50 % | 0 % | 0 % | 50 % | 8 % | Non-Coding |
| 41 | NC_021101 | TCAG | 3 | 54097 | 54107 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 42 | NC_021101 | TGCA | 3 | 57655 | 57667 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 50177086 |
| 43 | NC_021101 | TAGT | 3 | 60389 | 60400 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 44 | NC_021101 | AAAT | 3 | 60903 | 60914 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 45 | NC_021101 | TTTC | 3 | 62214 | 62224 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 46 | NC_021101 | AGTA | 3 | 66861 | 66871 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 47 | NC_021101 | AGAA | 3 | 68599 | 68610 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 48 | NC_021101 | TTTC | 3 | 70612 | 70624 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 49 | NC_021101 | TTCT | 3 | 71331 | 71343 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 50 | NC_021101 | ATAA | 3 | 71587 | 71597 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 50177087 |
| 51 | NC_021101 | TGAA | 3 | 73892 | 73902 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 50177087 |
| 52 | NC_021101 | TTTC | 3 | 76845 | 76855 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 50177087 |
| 53 | NC_021101 | TATT | 3 | 78199 | 78209 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50177087 |
| 54 | NC_021101 | TTTC | 3 | 79895 | 79905 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 50177087 |
| 55 | NC_021101 | TTTA | 3 | 81250 | 81260 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50177087 |
| 56 | NC_021101 | TATT | 3 | 81261 | 81272 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50177087 |
| 57 | NC_021101 | GAAT | 3 | 83760 | 83771 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 50177087 |
| 58 | NC_021101 | TTTG | 3 | 84428 | 84438 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 50177087 |
| 59 | NC_021101 | CAAT | 3 | 84599 | 84609 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 50177087 |
| 60 | NC_021101 | CTTT | 3 | 90782 | 90793 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 50177087 |
| 61 | NC_021101 | CTTT | 3 | 90831 | 90841 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 50177087 |
| 62 | NC_021101 | TGAT | 3 | 92665 | 92677 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 50177087 |
| 63 | NC_021101 | TGAT | 3 | 92707 | 92719 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 50177087 |
| 64 | NC_021101 | AATA | 3 | 93593 | 93605 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 50177087 |
| 65 | NC_021101 | GTAT | 3 | 96192 | 96202 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 50177087 |
| 66 | NC_021101 | TTAT | 6 | 101015 | 101038 | 24 | 25 % | 75 % | 0 % | 0 % | 4 % | 50177091 |
| 67 | NC_021101 | ATCC | 3 | 104872 | 104883 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 50177091 |
| 68 | NC_021101 | TCTA | 3 | 105272 | 105283 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 50177091 |
| 69 | NC_021101 | AAGG | 3 | 105411 | 105421 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 50177091 |
| 70 | NC_021101 | GAGG | 3 | 108167 | 108178 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 50177091 |
| 71 | NC_021101 | AGGT | 3 | 108379 | 108390 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 50177091 |
| 72 | NC_021101 | TAAG | 3 | 109499 | 109509 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 50177091 |
| 73 | NC_021101 | ATTC | 3 | 110990 | 111001 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 50177091 |
| 74 | NC_021101 | AAAT | 3 | 114047 | 114057 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 50177091 |
| 75 | NC_021101 | GAAA | 3 | 115870 | 115880 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 50177091 |
| 76 | NC_021101 | AAAT | 3 | 119430 | 119440 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 50177091 |
| 77 | NC_021101 | GCAT | 3 | 119965 | 119977 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 50177091 |
| 78 | NC_021101 | AAAT | 3 | 119986 | 119997 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 50177091 |
| 79 | NC_021101 | AAGA | 3 | 121370 | 121380 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 50177091 |
| 80 | NC_021101 | TATT | 3 | 121462 | 121473 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50177091 |
| 81 | NC_021101 | TGGG | 3 | 125400 | 125410 | 11 | 0 % | 25 % | 75 % | 0 % | 9 % | 50177091 |
| 82 | NC_021101 | ATTT | 3 | 126941 | 126952 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 50177091 |
| 83 | NC_021101 | GAAA | 3 | 126997 | 127007 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 50177091 |
| 84 | NC_021101 | TTTA | 3 | 127753 | 127763 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 50177091 |
| 85 | NC_021101 | CATT | 3 | 128084 | 128095 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 50177091 |
| 86 | NC_021101 | AATA | 3 | 128512 | 128522 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 50177091 |
| 87 | NC_021101 | GAAT | 3 | 132288 | 132299 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 50177091 |
| 88 | NC_021101 | CTTA | 3 | 133780 | 133790 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 50177091 |
| 89 | NC_021101 | CTAC | 3 | 134897 | 134908 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 50177091 |
| 90 | NC_021101 | CCTT | 3 | 137868 | 137878 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 50177091 |
| 91 | NC_021101 | GGAT | 3 | 138406 | 138417 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 50177091 |
| 92 | NC_021101 | AGAA | 3 | 138905 | 138917 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 50177091 |
| 93 | NC_021101 | ATAA | 6 | 142251 | 142274 | 24 | 75 % | 25 % | 0 % | 0 % | 4 % | 50177091 |
| 94 | NC_021101 | ATCA | 3 | 150612 | 150624 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 95 | NC_021101 | AAAG | 3 | 152448 | 152458 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 96 | NC_021101 | TATT | 3 | 153492 | 153503 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |