Hexa-nucleotide Imperfect Repeats of Chondrus crispus plastid complete genome
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020795 | AATAAA | 3 | 11000 | 11018 | 19 | 83.33 % | 16.67 % | 0 % | 0 % | 10 % | 47143489 |
2 | NC_020795 | ATCCAA | 3 | 13893 | 13910 | 18 | 50 % | 16.67 % | 0 % | 33.33 % | 0 % | 47143489 |
3 | NC_020795 | TTAAAT | 3 | 46296 | 46313 | 18 | 50 % | 50 % | 0 % | 0 % | 5 % | 47143493 |
4 | NC_020795 | TGCACC | 4 | 53089 | 53112 | 24 | 16.67 % | 16.67 % | 16.67 % | 50 % | 8 % | 47143493 |
5 | NC_020795 | ATCAAT | 3 | 56597 | 56614 | 18 | 50 % | 33.33 % | 0 % | 16.67 % | 5 % | 47143494 |
6 | NC_020795 | TATAAT | 3 | 73188 | 73204 | 17 | 50 % | 50 % | 0 % | 0 % | 5 % | Non-Coding |
7 | NC_020795 | TAATTT | 3 | 77677 | 77695 | 19 | 33.33 % | 66.67 % | 0 % | 0 % | 10 % | 47143497 |
8 | NC_020795 | GTAATA | 3 | 112839 | 112855 | 17 | 50 % | 33.33 % | 16.67 % | 0 % | 5 % | 47143501 |
9 | NC_020795 | AATATA | 3 | 114882 | 114899 | 18 | 66.67 % | 33.33 % | 0 % | 0 % | 5 % | 47143501 |
10 | NC_020795 | AGAAGC | 3 | 120017 | 120034 | 18 | 50 % | 0 % | 33.33 % | 16.67 % | 5 % | 47143501 |
11 | NC_020795 | TAAAAT | 3 | 128700 | 128718 | 19 | 66.67 % | 33.33 % | 0 % | 0 % | 10 % | 47143502 |
12 | NC_020795 | TTTATA | 3 | 150300 | 150317 | 18 | 33.33 % | 66.67 % | 0 % | 0 % | 5 % | 47143505 |
13 | NC_020795 | ATAAAA | 3 | 172240 | 172257 | 18 | 83.33 % | 16.67 % | 0 % | 0 % | 5 % | Non-Coding |