Penta-nucleotide Imperfect Repeats of Chondrus crispus plastid complete genome
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020795 | TACTT | 3 | 26952 | 26965 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
2 | NC_020795 | ATCAA | 3 | 37362 | 37375 | 14 | 60 % | 20 % | 0 % | 20 % | 7 % | 47143492 |
3 | NC_020795 | AATCC | 3 | 39929 | 39943 | 15 | 40 % | 20 % | 0 % | 40 % | 6 % | 47143492 |
4 | NC_020795 | ATTAT | 3 | 41801 | 41815 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
5 | NC_020795 | TAAAA | 4 | 60030 | 60048 | 19 | 80 % | 20 % | 0 % | 0 % | 10 % | Non-Coding |
6 | NC_020795 | TAATA | 3 | 73837 | 73850 | 14 | 60 % | 40 % | 0 % | 0 % | 7 % | 47143496 |
7 | NC_020795 | ATTTT | 3 | 77805 | 77819 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | 47143497 |
8 | NC_020795 | CTCTT | 3 | 78693 | 78706 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 47143497 |
9 | NC_020795 | TTATA | 3 | 96872 | 96886 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
10 | NC_020795 | TAATA | 3 | 103696 | 103709 | 14 | 60 % | 40 % | 0 % | 0 % | 7 % | Non-Coding |
11 | NC_020795 | GAATT | 3 | 104870 | 104883 | 14 | 40 % | 40 % | 20 % | 0 % | 7 % | 47143500 |
12 | NC_020795 | TAAAA | 5 | 111901 | 111925 | 25 | 80 % | 20 % | 0 % | 0 % | 8 % | 47143501 |
13 | NC_020795 | CAAAA | 3 | 112043 | 112056 | 14 | 80 % | 0 % | 0 % | 20 % | 7 % | 47143501 |
14 | NC_020795 | AAGAA | 3 | 125456 | 125470 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 47143502 |
15 | NC_020795 | CATTA | 3 | 128436 | 128449 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | 47143502 |
16 | NC_020795 | TTCTT | 3 | 132532 | 132545 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 47143502 |
17 | NC_020795 | ATATT | 3 | 133066 | 133079 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 47143502 |
18 | NC_020795 | GTTTT | 3 | 137598 | 137611 | 14 | 0 % | 80 % | 20 % | 0 % | 7 % | 47143503 |
19 | NC_020795 | TATAA | 3 | 172392 | 172406 | 15 | 60 % | 40 % | 0 % | 0 % | 6 % | Non-Coding |