Tetra-nucleotide Imperfect Repeats of Salvia miltiorrhiza chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_020431 | CATT | 3 | 4011 | 4022 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 2 | NC_020431 | TCTT | 3 | 5197 | 5207 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45901447 |
| 3 | NC_020431 | AACA | 3 | 5804 | 5816 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 45901447 |
| 4 | NC_020431 | TTTG | 3 | 6717 | 6727 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 5 | NC_020431 | CTTT | 3 | 7307 | 7318 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | Non-Coding |
| 6 | NC_020431 | ATAA | 3 | 8201 | 8212 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 7 | NC_020431 | TAAA | 3 | 9250 | 9261 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_020431 | GTCT | 3 | 11041 | 11052 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 45901447 |
| 9 | NC_020431 | ATGA | 3 | 12193 | 12205 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 45901447 |
| 10 | NC_020431 | ATTT | 3 | 14002 | 14012 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 11 | NC_020431 | ATTT | 3 | 14272 | 14282 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_020431 | ATAA | 3 | 15302 | 15312 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 13 | NC_020431 | TCAA | 3 | 16533 | 16544 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 45901448 |
| 14 | NC_020431 | ATTT | 3 | 17358 | 17368 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 45901448 |
| 15 | NC_020431 | CCTA | 3 | 24340 | 24350 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 45901448 |
| 16 | NC_020431 | AAAG | 3 | 27075 | 27086 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 17 | NC_020431 | GAAA | 3 | 33615 | 33626 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45901448 |
| 18 | NC_020431 | ATTG | 3 | 37830 | 37840 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 45901449 |
| 19 | NC_020431 | ATTT | 3 | 41217 | 41228 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 20 | NC_020431 | ATTT | 3 | 41733 | 41745 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 21 | NC_020431 | GATA | 3 | 44297 | 44308 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 22 | NC_020431 | ATTC | 3 | 45629 | 45641 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 23 | NC_020431 | ACTC | 3 | 47097 | 47108 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 24 | NC_020431 | TAAA | 3 | 47802 | 47813 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 25 | NC_020431 | CTTT | 3 | 47827 | 47838 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 26 | NC_020431 | AATA | 3 | 53804 | 53815 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_020431 | TGCA | 3 | 55463 | 55475 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 45901450 |
| 28 | NC_020431 | CCTT | 3 | 58156 | 58167 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | 45901450 |
| 29 | NC_020431 | ATTT | 3 | 58206 | 58216 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 30 | NC_020431 | TAAT | 4 | 58526 | 58540 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 31 | NC_020431 | GAAA | 3 | 66704 | 66715 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45901451 |
| 32 | NC_020431 | AAAC | 5 | 66862 | 66882 | 21 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 33 | NC_020431 | TTGT | 3 | 67192 | 67202 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 34 | NC_020431 | AATA | 4 | 68064 | 68079 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 35 | NC_020431 | TTTC | 3 | 69671 | 69681 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45901447 |
| 36 | NC_020431 | ATTG | 3 | 75479 | 75491 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 45901447 |
| 37 | NC_020431 | TTTG | 3 | 76808 | 76819 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 45901447 |
| 38 | NC_020431 | AAAT | 3 | 79868 | 79878 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 45901447 |
| 39 | NC_020431 | TTTC | 3 | 80411 | 80421 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45901447 |
| 40 | NC_020431 | ATCG | 3 | 87138 | 87150 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 45901447 |
| 41 | NC_020431 | AATA | 3 | 90290 | 90302 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 45901447 |
| 42 | NC_020431 | CCCT | 3 | 96641 | 96651 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 45901447 |
| 43 | NC_020431 | ATCC | 3 | 100779 | 100790 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 45901451 |
| 44 | NC_020431 | TCTA | 3 | 101172 | 101183 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45901451 |
| 45 | NC_020431 | AAGG | 3 | 101305 | 101315 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 45901451 |
| 46 | NC_020431 | AGGT | 3 | 104240 | 104251 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 45901451 |
| 47 | NC_020431 | TAAG | 3 | 105360 | 105370 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45901451 |
| 48 | NC_020431 | GGAA | 3 | 107328 | 107338 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 45901451 |
| 49 | NC_020431 | ACTT | 3 | 111320 | 111331 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45901451 |
| 50 | NC_020431 | CTTA | 3 | 112890 | 112900 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45901451 |
| 51 | NC_020431 | GAAA | 3 | 113175 | 113186 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45901451 |
| 52 | NC_020431 | ATGC | 3 | 120067 | 120077 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 45901451 |
| 53 | NC_020431 | TTTG | 3 | 123992 | 124002 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 45901451 |
| 54 | NC_020431 | AAAG | 3 | 124606 | 124616 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45901451 |
| 55 | NC_020431 | AAAG | 3 | 125775 | 125785 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45901451 |
| 56 | NC_020431 | TTCC | 3 | 126686 | 126696 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 45901451 |
| 57 | NC_020431 | CTTA | 3 | 128654 | 128664 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45901451 |
| 58 | NC_020431 | CCTT | 3 | 132709 | 132719 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 45901451 |
| 59 | NC_020431 | GGAT | 3 | 133234 | 133245 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 45901451 |
| 60 | NC_020431 | TATT | 3 | 143722 | 143734 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 45901455 |
| 61 | NC_020431 | TGAT | 3 | 144754 | 144766 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 45901455 |
| 62 | NC_020431 | CGAT | 3 | 146874 | 146886 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 45901455 |
| 63 | NC_020431 | TTTG | 3 | 148258 | 148268 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 45901455 |