Penta-nucleotide Imperfect Repeats of Calamus caryotoides plastid
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020365 | TCTCT | 3 | 4970 | 4983 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 45633087 |
2 | NC_020365 | CATAT | 4 | 6165 | 6184 | 20 | 40 % | 40 % | 0 % | 20 % | 10 % | Non-Coding |
3 | NC_020365 | AAGAA | 3 | 42965 | 42979 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 45633089 |
4 | NC_020365 | TATTT | 3 | 46808 | 46821 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
5 | NC_020365 | GTAAA | 3 | 47054 | 47068 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
6 | NC_020365 | TAAAG | 5 | 47108 | 47132 | 25 | 60 % | 20 % | 20 % | 0 % | 8 % | Non-Coding |
7 | NC_020365 | TTGTT | 3 | 51517 | 51530 | 14 | 0 % | 80 % | 20 % | 0 % | 7 % | Non-Coding |
8 | NC_020365 | TTGAA | 3 | 67106 | 67120 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 45633091 |
9 | NC_020365 | TTGAA | 3 | 68696 | 68710 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | Non-Coding |
10 | NC_020365 | TCCGG | 3 | 96668 | 96682 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 45633093 |
11 | NC_020365 | GAAAA | 3 | 111228 | 111241 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | 45633095 |
12 | NC_020365 | TGTTA | 3 | 114983 | 114998 | 16 | 20 % | 60 % | 20 % | 0 % | 6 % | 45633095 |
13 | NC_020365 | ATTTA | 6 | 119682 | 119711 | 30 | 40 % | 60 % | 0 % | 0 % | 6 % | 45633095 |
14 | NC_020365 | TATGT | 3 | 119779 | 119793 | 15 | 20 % | 60 % | 20 % | 0 % | 6 % | 45633095 |
15 | NC_020365 | TCTTT | 3 | 128620 | 128634 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 45633095 |
16 | NC_020365 | CTTTT | 4 | 130135 | 130153 | 19 | 0 % | 80 % | 0 % | 20 % | 5 % | 45633095 |
17 | NC_020365 | TTTCT | 3 | 131556 | 131569 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 45633095 |
18 | NC_020365 | ACCGG | 3 | 146113 | 146127 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |