Tetra-nucleotide Imperfect Repeats of Heliconia collinsiana plastid
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_020362 | TTTA | 3 | 36 | 47 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 2 | NC_020362 | AAGT | 3 | 937 | 947 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45606143 |
| 3 | NC_020362 | AGAA | 3 | 2391 | 2401 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45606143 |
| 4 | NC_020362 | TTTG | 3 | 5647 | 5657 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 45606143 |
| 5 | NC_020362 | ATTG | 3 | 5860 | 5871 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 45606143 |
| 6 | NC_020362 | ATTT | 3 | 8125 | 8135 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 7 | NC_020362 | TAAA | 3 | 9248 | 9259 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_020362 | TAAT | 3 | 9859 | 9869 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_020362 | GAAA | 3 | 11877 | 11887 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 10 | NC_020362 | TTTA | 3 | 15166 | 15177 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 11 | NC_020362 | TTTC | 3 | 16056 | 16067 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 12 | NC_020362 | CATT | 3 | 16072 | 16083 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 13 | NC_020362 | ACAT | 3 | 16902 | 16914 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 14 | NC_020362 | TCAA | 3 | 19333 | 19344 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 45606144 |
| 15 | NC_020362 | GAAA | 3 | 28853 | 28865 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 45606144 |
| 16 | NC_020362 | TAAA | 3 | 29827 | 29838 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 17 | NC_020362 | CTAT | 3 | 30043 | 30054 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 18 | NC_020362 | GAAA | 3 | 31425 | 31436 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 19 | NC_020362 | TTTC | 3 | 32292 | 32302 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 20 | NC_020362 | TTTA | 3 | 35497 | 35507 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 21 | NC_020362 | ATTT | 3 | 36412 | 36423 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 22 | NC_020362 | GAAA | 3 | 38520 | 38531 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45606144 |
| 23 | NC_020362 | TTAT | 3 | 40264 | 40274 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 24 | NC_020362 | AAAT | 3 | 40591 | 40601 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 25 | NC_020362 | AAGA | 3 | 43913 | 43924 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45606145 |
| 26 | NC_020362 | TTAA | 3 | 46533 | 46544 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_020362 | TTTC | 3 | 47438 | 47449 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45606145 |
| 28 | NC_020362 | CAAA | 3 | 51455 | 51466 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 29 | NC_020362 | TTGA | 3 | 51547 | 51559 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 30 | NC_020362 | ATTT | 3 | 55098 | 55108 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 31 | NC_020362 | TCTA | 3 | 59998 | 60008 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 32 | NC_020362 | ATTT | 3 | 62678 | 62690 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 33 | NC_020362 | ATTT | 4 | 64370 | 64385 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 34 | NC_020362 | TACT | 3 | 64482 | 64493 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 35 | NC_020362 | TTTC | 3 | 64704 | 64715 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45606146 |
| 36 | NC_020362 | CTAA | 6 | 65771 | 65792 | 22 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 37 | NC_020362 | GAAA | 3 | 68372 | 68383 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | Non-Coding |
| 38 | NC_020362 | AAAG | 3 | 68580 | 68591 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 39 | NC_020362 | AAAG | 3 | 72780 | 72790 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 40 | NC_020362 | GAAA | 3 | 73418 | 73429 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45606147 |
| 41 | NC_020362 | TTTC | 3 | 74539 | 74551 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 42 | NC_020362 | AAAT | 3 | 74694 | 74704 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 43 | NC_020362 | TTTA | 3 | 75996 | 76007 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45606149 |
| 44 | NC_020362 | TTTC | 3 | 76763 | 76774 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45606149 |
| 45 | NC_020362 | TTTC | 3 | 77276 | 77286 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45606149 |
| 46 | NC_020362 | AAAG | 3 | 81080 | 81090 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45606149 |
| 47 | NC_020362 | TTCT | 3 | 87982 | 87993 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45606149 |
| 48 | NC_020362 | TTTA | 3 | 92993 | 93004 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45606149 |
| 49 | NC_020362 | TTCT | 3 | 93811 | 93821 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45606149 |
| 50 | NC_020362 | TGAT | 3 | 96826 | 96838 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 45606149 |
| 51 | NC_020362 | AATA | 3 | 97721 | 97733 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 45606149 |
| 52 | NC_020362 | TTTC | 3 | 97783 | 97794 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45606149 |
| 53 | NC_020362 | TTGA | 3 | 98604 | 98616 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 45606149 |
| 54 | NC_020362 | ATCC | 3 | 109058 | 109069 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 45606151 |
| 55 | NC_020362 | TCTA | 3 | 109447 | 109458 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45606151 |
| 56 | NC_020362 | GAGG | 3 | 112294 | 112305 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 45606151 |
| 57 | NC_020362 | AGGT | 3 | 112506 | 112517 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 45606151 |
| 58 | NC_020362 | CATT | 3 | 115077 | 115087 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45606151 |
| 59 | NC_020362 | GGAA | 3 | 115648 | 115658 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 45606151 |
| 60 | NC_020362 | TAAT | 4 | 116618 | 116634 | 17 | 50 % | 50 % | 0 % | 0 % | 5 % | 45606151 |
| 61 | NC_020362 | AGTT | 3 | 118318 | 118328 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 45606151 |
| 62 | NC_020362 | AAAT | 3 | 119270 | 119280 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 45606151 |
| 63 | NC_020362 | TTAA | 3 | 119378 | 119389 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 45606151 |
| 64 | NC_020362 | TTAA | 3 | 120533 | 120543 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 45606151 |
| 65 | NC_020362 | ATTT | 4 | 125284 | 125298 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | 45606151 |
| 66 | NC_020362 | TTAA | 3 | 125992 | 126004 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 45606151 |
| 67 | NC_020362 | ATAA | 4 | 127925 | 127940 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 45606151 |
| 68 | NC_020362 | GAAT | 3 | 128404 | 128414 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45606151 |
| 69 | NC_020362 | ATTC | 3 | 130253 | 130263 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45606151 |
| 70 | NC_020362 | CATT | 3 | 132767 | 132778 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 45606151 |
| 71 | NC_020362 | AAAT | 3 | 133546 | 133557 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 45606151 |
| 72 | NC_020362 | TTCC | 3 | 136188 | 136198 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 45606151 |
| 73 | NC_020362 | GGAT | 3 | 142777 | 142788 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 45606151 |
| 74 | NC_020362 | AGCA | 3 | 152320 | 152330 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | Non-Coding |
| 75 | NC_020362 | TCAA | 3 | 153230 | 153242 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 45606151 |
| 76 | NC_020362 | TGAA | 3 | 154051 | 154062 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 45606151 |
| 77 | NC_020362 | ATCA | 3 | 155032 | 155044 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 45606151 |
| 78 | NC_020362 | CTTT | 3 | 155053 | 155063 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45606151 |
| 79 | NC_020362 | TGAT | 3 | 155127 | 155139 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 45606151 |
| 80 | NC_020362 | ATTT | 3 | 157922 | 157933 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45606151 |
| 81 | NC_020362 | ATAA | 3 | 158865 | 158876 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 45606151 |
| 82 | NC_020362 | CATT | 3 | 161758 | 161768 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |