Tetra-nucleotide Imperfect Repeats of Podocarpus totara chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_020361 | TCAA | 4 | 308 | 323 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | Non-Coding |
| 2 | NC_020361 | GATT | 3 | 613 | 625 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 45606133 |
| 3 | NC_020361 | GCAT | 3 | 2252 | 2263 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 45606133 |
| 4 | NC_020361 | TGAA | 3 | 3164 | 3174 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 5 | NC_020361 | GAAC | 3 | 3732 | 3742 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | Non-Coding |
| 6 | NC_020361 | ATTA | 3 | 7009 | 7020 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 45606133 |
| 7 | NC_020361 | CTAT | 3 | 7868 | 7878 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 8 | NC_020361 | ATAG | 3 | 7888 | 7899 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 9 | NC_020361 | AAAG | 3 | 8982 | 8992 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 10 | NC_020361 | CATT | 3 | 11107 | 11118 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 45606134 |
| 11 | NC_020361 | AGAA | 3 | 13338 | 13349 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 12 | NC_020361 | TGAT | 4 | 24065 | 24080 | 16 | 25 % | 50 % | 25 % | 0 % | 6 % | Non-Coding |
| 13 | NC_020361 | ATCA | 3 | 27420 | 27431 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 14 | NC_020361 | CGTT | 3 | 27916 | 27926 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | Non-Coding |
| 15 | NC_020361 | TTGA | 3 | 31203 | 31214 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 16 | NC_020361 | GACA | 3 | 32407 | 32418 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | 45606135 |
| 17 | NC_020361 | GAAT | 3 | 33889 | 33899 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 18 | NC_020361 | GGAA | 3 | 34000 | 34011 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | Non-Coding |
| 19 | NC_020361 | TTAC | 3 | 34140 | 34150 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45606135 |
| 20 | NC_020361 | TATT | 3 | 41143 | 41153 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 21 | NC_020361 | AAAG | 3 | 41210 | 41221 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45606135 |
| 22 | NC_020361 | AAAT | 3 | 42148 | 42158 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 45606135 |
| 23 | NC_020361 | CTAT | 4 | 42803 | 42818 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 24 | NC_020361 | ATAG | 3 | 42823 | 42834 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |
| 25 | NC_020361 | ATTC | 3 | 49904 | 49915 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45606135 |
| 26 | NC_020361 | TTTC | 3 | 57628 | 57638 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 27 | NC_020361 | TTCT | 3 | 58189 | 58200 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 28 | NC_020361 | CAAT | 3 | 59692 | 59702 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 45606137 |
| 29 | NC_020361 | AATT | 3 | 62243 | 62253 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 45606137 |
| 30 | NC_020361 | TCCA | 3 | 63014 | 63025 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 31 | NC_020361 | ATCT | 3 | 63504 | 63514 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45606137 |
| 32 | NC_020361 | TTCT | 3 | 65197 | 65208 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45606137 |
| 33 | NC_020361 | CAAA | 3 | 68550 | 68561 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 45606137 |
| 34 | NC_020361 | TCTT | 3 | 68987 | 68999 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 45606137 |
| 35 | NC_020361 | TCTA | 3 | 69131 | 69142 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45606137 |
| 36 | NC_020361 | ATTT | 3 | 75992 | 76003 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45606137 |
| 37 | NC_020361 | CTGT | 3 | 76984 | 76996 | 13 | 0 % | 50 % | 25 % | 25 % | 7 % | 45606137 |
| 38 | NC_020361 | AAAC | 3 | 80634 | 80644 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 45606137 |
| 39 | NC_020361 | AATC | 3 | 88067 | 88078 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 45606137 |
| 40 | NC_020361 | CAAT | 3 | 91903 | 91915 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 45606137 |
| 41 | NC_020361 | GTTT | 3 | 92396 | 92406 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 45606137 |
| 42 | NC_020361 | AAAT | 3 | 92640 | 92652 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 45606137 |
| 43 | NC_020361 | TTGA | 3 | 93246 | 93257 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 45606137 |
| 44 | NC_020361 | TCGA | 3 | 94336 | 94347 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 45606137 |
| 45 | NC_020361 | TCGA | 3 | 97789 | 97801 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 45606137 |
| 46 | NC_020361 | CTAC | 3 | 99166 | 99177 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 45606137 |
| 47 | NC_020361 | ATTA | 4 | 103333 | 103348 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | 45606137 |
| 48 | NC_020361 | ACAT | 3 | 107311 | 107321 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 45606137 |
| 49 | NC_020361 | AAAG | 3 | 108260 | 108271 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45606137 |
| 50 | NC_020361 | GAAA | 3 | 113654 | 113664 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45606139 |
| 51 | NC_020361 | AAAG | 3 | 114960 | 114971 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45606139 |
| 52 | NC_020361 | CTTT | 3 | 115188 | 115198 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45606139 |
| 53 | NC_020361 | CATT | 3 | 117078 | 117089 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45606139 |
| 54 | NC_020361 | AAGT | 3 | 124415 | 124425 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45606140 |
| 55 | NC_020361 | CATA | 3 | 124818 | 124829 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | Non-Coding |
| 56 | NC_020361 | ATAG | 3 | 124951 | 124962 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |
| 57 | NC_020361 | CATT | 3 | 126636 | 126647 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45606140 |
| 58 | NC_020361 | AAAT | 3 | 126766 | 126777 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 45606140 |
| 59 | NC_020361 | ATTT | 3 | 127658 | 127668 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 60 | NC_020361 | CTTT | 3 | 128826 | 128837 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 61 | NC_020361 | CTAT | 3 | 130707 | 130718 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 62 | NC_020361 | ATTA | 4 | 130876 | 130890 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 63 | NC_020361 | TTTC | 3 | 131403 | 131413 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45606140 |
| 64 | NC_020361 | ATTC | 3 | 131790 | 131801 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |