Tetra-nucleotide Imperfect Repeats of Arundinaria gigantea chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_020341 | AAGT | 3 | 786 | 796 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284946 |
| 2 | NC_020341 | TAAA | 3 | 4453 | 4464 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_020341 | TTTA | 3 | 4498 | 4509 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_020341 | TTCT | 3 | 5141 | 5151 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284946 |
| 5 | NC_020341 | TTAT | 3 | 5856 | 5866 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_020341 | GAAA | 3 | 10902 | 10913 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284946 |
| 7 | NC_020341 | AAGT | 3 | 12322 | 12332 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 8 | NC_020341 | CTTT | 6 | 13238 | 13261 | 24 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 9 | NC_020341 | CCTT | 3 | 14685 | 14696 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | Non-Coding |
| 10 | NC_020341 | AAGA | 3 | 14841 | 14852 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 11 | NC_020341 | ATTT | 3 | 16448 | 16458 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_020341 | GTAT | 3 | 17380 | 17390 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 13 | NC_020341 | ATAC | 4 | 18257 | 18272 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | Non-Coding |
| 14 | NC_020341 | TTTC | 3 | 18854 | 18864 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 15 | NC_020341 | AAAT | 3 | 18894 | 18905 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 16 | NC_020341 | AAAG | 3 | 19347 | 19357 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 17 | NC_020341 | ATCA | 3 | 19534 | 19544 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 18 | NC_020341 | ATGA | 3 | 19892 | 19903 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 19 | NC_020341 | TTTC | 3 | 22252 | 22264 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 45284947 |
| 20 | NC_020341 | AGAA | 3 | 26840 | 26851 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284947 |
| 21 | NC_020341 | TTCA | 3 | 29581 | 29591 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45284947 |
| 22 | NC_020341 | ATTT | 3 | 31729 | 31740 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 23 | NC_020341 | CTTT | 3 | 34833 | 34843 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 24 | NC_020341 | TTTC | 3 | 38470 | 38480 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 25 | NC_020341 | AAGA | 3 | 41773 | 41784 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284948 |
| 26 | NC_020341 | CTAG | 3 | 42716 | 42728 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 45284948 |
| 27 | NC_020341 | ATCA | 3 | 44752 | 44762 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 45284948 |
| 28 | NC_020341 | TCCT | 3 | 45160 | 45171 | 12 | 0 % | 50 % | 0 % | 50 % | 0 % | 45284948 |
| 29 | NC_020341 | AAAG | 3 | 47219 | 47229 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 30 | NC_020341 | TTGA | 3 | 49193 | 49205 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 31 | NC_020341 | TATT | 3 | 50466 | 50477 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 32 | NC_020341 | CAGA | 3 | 50960 | 50970 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 45284948 |
| 33 | NC_020341 | TAGG | 4 | 54142 | 54157 | 16 | 25 % | 25 % | 50 % | 0 % | 6 % | Non-Coding |
| 34 | NC_020341 | AATT | 3 | 56279 | 56290 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 35 | NC_020341 | AATA | 4 | 58609 | 58625 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | Non-Coding |
| 36 | NC_020341 | TCTT | 3 | 61735 | 61746 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284949 |
| 37 | NC_020341 | ATTC | 3 | 61909 | 61919 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 38 | NC_020341 | TGTT | 3 | 63087 | 63097 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 39 | NC_020341 | TAAA | 3 | 65351 | 65362 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 40 | NC_020341 | AAAG | 3 | 66075 | 66085 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 41 | NC_020341 | TATT | 3 | 66989 | 66999 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 42 | NC_020341 | AAAT | 3 | 67317 | 67328 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 45284950 |
| 43 | NC_020341 | ATTT | 3 | 67577 | 67588 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 44 | NC_020341 | AGAA | 3 | 70359 | 70370 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 45284946 |
| 45 | NC_020341 | TTTA | 3 | 73688 | 73699 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 45284946 |
| 46 | NC_020341 | GAAA | 4 | 73801 | 73816 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 45284946 |
| 47 | NC_020341 | TCTT | 5 | 75538 | 75556 | 19 | 0 % | 75 % | 0 % | 25 % | 10 % | 45284946 |
| 48 | NC_020341 | TTTC | 3 | 76263 | 76273 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284946 |
| 49 | NC_020341 | AGAA | 3 | 78221 | 78231 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284946 |
| 50 | NC_020341 | AATG | 3 | 83046 | 83056 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284946 |
| 51 | NC_020341 | TTCT | 3 | 91375 | 91385 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284946 |
| 52 | NC_020341 | AAAC | 3 | 96263 | 96275 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 45284950 |
| 53 | NC_020341 | ATCC | 3 | 96397 | 96408 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 45284950 |
| 54 | NC_020341 | CTAT | 3 | 96785 | 96796 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45284950 |
| 55 | NC_020341 | ACGG | 3 | 99655 | 99666 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | 45284950 |
| 56 | NC_020341 | AGGT | 3 | 99939 | 99950 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 45284950 |
| 57 | NC_020341 | AACG | 3 | 101264 | 101275 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | 45284950 |
| 58 | NC_020341 | AAAG | 4 | 102601 | 102616 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 45284950 |
| 59 | NC_020341 | GAAT | 3 | 104218 | 104228 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284950 |
| 60 | NC_020341 | AAGG | 3 | 104230 | 104241 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 45284950 |
| 61 | NC_020341 | AAAG | 3 | 104511 | 104521 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284950 |
| 62 | NC_020341 | GTTA | 3 | 104672 | 104684 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 45284950 |
| 63 | NC_020341 | CAAA | 3 | 107723 | 107734 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 45284950 |
| 64 | NC_020341 | AAAT | 4 | 111749 | 111768 | 20 | 75 % | 25 % | 0 % | 0 % | 5 % | 45284950 |
| 65 | NC_020341 | TTTA | 3 | 112556 | 112567 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45284950 |
| 66 | NC_020341 | AATA | 3 | 114945 | 114956 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 45284950 |
| 67 | NC_020341 | ATTC | 3 | 117340 | 117350 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45284950 |
| 68 | NC_020341 | CTTT | 4 | 118952 | 118967 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 45284950 |
| 69 | NC_020341 | TCGT | 3 | 120292 | 120303 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 45284950 |
| 70 | NC_020341 | CTTA | 3 | 120499 | 120509 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45284950 |
| 71 | NC_020341 | CCGT | 3 | 121902 | 121913 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | 45284950 |
| 72 | NC_020341 | AGGA | 3 | 124936 | 124947 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 45284950 |
| 73 | NC_020341 | GGAT | 3 | 125160 | 125171 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 45284950 |
| 74 | NC_020341 | AGAA | 3 | 130183 | 130193 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284953 |
| 75 | NC_020341 | TGAA | 3 | 135704 | 135715 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 76 | NC_020341 | CATT | 3 | 138512 | 138522 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |