Tetra-nucleotide Imperfect Repeats of Chrysanthemum indicum voucher HeN001 chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_020320 | CTAT | 3 | 81 | 92 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 2 | NC_020320 | AAGT | 3 | 1156 | 1166 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284903 |
| 3 | NC_020320 | TAAA | 3 | 1776 | 1787 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_020320 | AAAT | 3 | 4427 | 4437 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 5 | NC_020320 | TAAA | 3 | 4622 | 4632 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_020320 | TATT | 3 | 5150 | 5160 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 7 | NC_020320 | AATT | 3 | 6036 | 6047 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 45284903 |
| 8 | NC_020320 | TTCT | 3 | 7743 | 7753 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284903 |
| 9 | NC_020320 | GTTT | 3 | 9079 | 9090 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 10 | NC_020320 | TAAT | 3 | 10538 | 10553 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | 45284903 |
| 11 | NC_020320 | TTCT | 3 | 10917 | 10929 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 12 | NC_020320 | ATTC | 3 | 16817 | 16827 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45284903 |
| 13 | NC_020320 | AACA | 3 | 23621 | 23631 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 45284904 |
| 14 | NC_020320 | ACTT | 3 | 24293 | 24303 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45284904 |
| 15 | NC_020320 | ATTT | 4 | 27944 | 27959 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 16 | NC_020320 | AATA | 4 | 29893 | 29908 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 17 | NC_020320 | ATCT | 4 | 30420 | 30435 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 18 | NC_020320 | GAAA | 3 | 33606 | 33617 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284904 |
| 19 | NC_020320 | TGTA | 3 | 35131 | 35141 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 20 | NC_020320 | AAAT | 4 | 35577 | 35591 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 21 | NC_020320 | AATT | 3 | 37857 | 37867 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 45284905 |
| 22 | NC_020320 | AATG | 3 | 39504 | 39515 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 45284905 |
| 23 | NC_020320 | GAAA | 3 | 44111 | 44121 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 24 | NC_020320 | AATA | 3 | 46001 | 46013 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 25 | NC_020320 | AATC | 3 | 46911 | 46922 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | Non-Coding |
| 26 | NC_020320 | AAAT | 3 | 47875 | 47886 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_020320 | TTTA | 4 | 50303 | 50318 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 28 | NC_020320 | TCAG | 3 | 59570 | 59581 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 45284906 |
| 29 | NC_020320 | AATT | 3 | 62426 | 62436 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 30 | NC_020320 | TTTG | 3 | 62998 | 63009 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 45284906 |
| 31 | NC_020320 | TCTT | 3 | 63884 | 63895 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 32 | NC_020320 | AAAG | 3 | 65265 | 65276 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 33 | NC_020320 | AAAG | 3 | 65282 | 65293 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 34 | NC_020320 | TATT | 3 | 66619 | 66630 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 35 | NC_020320 | TGAA | 3 | 67638 | 67649 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_020320 | TTTC | 3 | 67672 | 67684 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 37 | NC_020320 | ATTT | 3 | 67792 | 67802 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 38 | NC_020320 | AAGA | 3 | 68934 | 68944 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284903 |
| 39 | NC_020320 | TTTA | 3 | 69108 | 69119 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45284903 |
| 40 | NC_020320 | ATTG | 3 | 69984 | 69995 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 45284903 |
| 41 | NC_020320 | ATTC | 3 | 70168 | 70179 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45284903 |
| 42 | NC_020320 | CTTT | 3 | 71048 | 71058 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284903 |
| 43 | NC_020320 | GGTT | 3 | 72086 | 72097 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 45284903 |
| 44 | NC_020320 | TAAA | 3 | 72882 | 72892 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 45284903 |
| 45 | NC_020320 | TTTC | 3 | 73772 | 73782 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284903 |
| 46 | NC_020320 | AGAA | 3 | 75641 | 75651 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284903 |
| 47 | NC_020320 | AAAT | 3 | 76418 | 76429 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 45284903 |
| 48 | NC_020320 | AATC | 4 | 76830 | 76845 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | 45284903 |
| 49 | NC_020320 | AAAG | 3 | 79671 | 79682 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284903 |
| 50 | NC_020320 | TTCT | 4 | 80911 | 80926 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 45284903 |
| 51 | NC_020320 | TTAT | 3 | 81099 | 81110 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45284903 |
| 52 | NC_020320 | CAAT | 3 | 81388 | 81398 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 45284903 |
| 53 | NC_020320 | TATC | 3 | 82069 | 82080 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45284903 |
| 54 | NC_020320 | CAAT | 3 | 87125 | 87136 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 45284903 |
| 55 | NC_020320 | AATA | 3 | 90328 | 90340 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 45284903 |
| 56 | NC_020320 | CCCT | 3 | 96553 | 96563 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 45284903 |
| 57 | NC_020320 | ATCC | 3 | 100914 | 100925 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 45284907 |
| 58 | NC_020320 | TCTA | 3 | 101142 | 101153 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45284907 |
| 59 | NC_020320 | AAGG | 3 | 101281 | 101291 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 45284907 |
| 60 | NC_020320 | GAGG | 3 | 104007 | 104018 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 45284907 |
| 61 | NC_020320 | AGGT | 3 | 104219 | 104230 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 45284907 |
| 62 | NC_020320 | TAAG | 3 | 105339 | 105349 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284907 |
| 63 | NC_020320 | GGAA | 3 | 107282 | 107292 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 45284907 |
| 64 | NC_020320 | CCTT | 3 | 108561 | 108571 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 45284907 |
| 65 | NC_020320 | TCTT | 3 | 110409 | 110420 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284907 |
| 66 | NC_020320 | AAGT | 3 | 112635 | 112645 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284907 |
| 67 | NC_020320 | GGCT | 3 | 112746 | 112756 | 11 | 0 % | 25 % | 50 % | 25 % | 9 % | 45284907 |
| 68 | NC_020320 | ATTT | 3 | 113999 | 114010 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45284907 |
| 69 | NC_020320 | GATT | 3 | 114898 | 114909 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 45284907 |
| 70 | NC_020320 | CTTT | 3 | 115294 | 115305 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284907 |
| 71 | NC_020320 | TATT | 3 | 120126 | 120137 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 45284907 |
| 72 | NC_020320 | AATT | 3 | 122218 | 122229 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 45284907 |
| 73 | NC_020320 | AAAT | 3 | 122888 | 122898 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 45284907 |
| 74 | NC_020320 | TTTA | 4 | 123652 | 123666 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | 45284907 |
| 75 | NC_020320 | ATTT | 3 | 124396 | 124406 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 45284907 |
| 76 | NC_020320 | AAAT | 3 | 125680 | 125690 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 45284907 |
| 77 | NC_020320 | CATT | 3 | 125743 | 125753 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45284907 |
| 78 | NC_020320 | TTCC | 3 | 126404 | 126414 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 45284907 |
| 79 | NC_020320 | CTTA | 3 | 128347 | 128357 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45284907 |
| 80 | NC_020320 | CCTT | 3 | 132405 | 132415 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 45284907 |
| 81 | NC_020320 | GGAT | 3 | 132771 | 132782 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 45284907 |
| 82 | NC_020320 | TATT | 3 | 143356 | 143368 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 45284911 |
| 83 | NC_020320 | TGAT | 3 | 144355 | 144367 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 45284911 |
| 84 | NC_020320 | ATTG | 3 | 146560 | 146571 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 45284911 |
| 85 | NC_020320 | ATTT | 3 | 147102 | 147113 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45284911 |