Penta-nucleotide Imperfect Repeats of Cycas revoluta chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020319 | AAGAA | 3 | 16633 | 16646 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | 45284892 |
2 | NC_020319 | TTCTT | 3 | 20407 | 20421 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 45284892 |
3 | NC_020319 | TTACA | 4 | 24277 | 24295 | 19 | 40 % | 40 % | 0 % | 20 % | 10 % | 45284892 |
4 | NC_020319 | TCTTT | 3 | 43392 | 43407 | 16 | 0 % | 80 % | 0 % | 20 % | 6 % | 45284892 |
5 | NC_020319 | CCGTT | 3 | 46900 | 46914 | 15 | 0 % | 40 % | 20 % | 40 % | 6 % | 45284892 |
6 | NC_020319 | CTCTT | 3 | 85368 | 85381 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 45284892 |
7 | NC_020319 | ATTCT | 3 | 93690 | 93703 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 45284892 |
8 | NC_020319 | TAAAA | 3 | 103808 | 103821 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 45284892 |
9 | NC_020319 | GATTC | 3 | 104060 | 104073 | 14 | 20 % | 40 % | 20 % | 20 % | 7 % | 45284892 |
10 | NC_020319 | GGAAA | 3 | 108077 | 108091 | 15 | 60 % | 0 % | 40 % | 0 % | 6 % | 45284892 |
11 | NC_020319 | TCCAT | 3 | 110931 | 110944 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | 45284892 |