Tetra-nucleotide Imperfect Repeats of Cycas revoluta chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_020319 | ATCG | 3 | 81 | 92 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 2 | NC_020319 | ATAG | 4 | 220 | 235 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 3 | NC_020319 | CTAT | 4 | 232 | 247 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 4 | NC_020319 | CTAC | 3 | 3820 | 3831 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | Non-Coding |
| 5 | NC_020319 | GGAT | 3 | 7249 | 7260 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 6 | NC_020319 | AGAA | 3 | 7774 | 7786 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 7 | NC_020319 | AAAG | 3 | 10012 | 10022 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284892 |
| 8 | NC_020319 | CCAA | 3 | 10701 | 10713 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | Non-Coding |
| 9 | NC_020319 | TCTA | 3 | 12831 | 12843 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 45284892 |
| 10 | NC_020319 | CGAA | 3 | 19798 | 19808 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 45284892 |
| 11 | NC_020319 | GAAA | 3 | 23850 | 23861 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284892 |
| 12 | NC_020319 | CTTT | 3 | 23976 | 23986 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284892 |
| 13 | NC_020319 | ATCT | 3 | 24418 | 24429 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45284892 |
| 14 | NC_020319 | ATGA | 3 | 24525 | 24537 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 45284892 |
| 15 | NC_020319 | GGAA | 3 | 30855 | 30866 | 12 | 50 % | 0 % | 50 % | 0 % | 0 % | 45284892 |
| 16 | NC_020319 | GAAT | 3 | 31744 | 31754 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284892 |
| 17 | NC_020319 | GAAA | 3 | 39931 | 39941 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284892 |
| 18 | NC_020319 | ACTT | 3 | 41753 | 41763 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45284892 |
| 19 | NC_020319 | AGAA | 4 | 44208 | 44222 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | 45284892 |
| 20 | NC_020319 | GATA | 3 | 52018 | 52029 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 45284892 |
| 21 | NC_020319 | ATAG | 3 | 59680 | 59691 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 45284892 |
| 22 | NC_020319 | ATCT | 4 | 77026 | 77041 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | 45284892 |
| 23 | NC_020319 | AAAG | 3 | 90585 | 90595 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284892 |
| 24 | NC_020319 | TTTC | 3 | 96317 | 96328 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284892 |
| 25 | NC_020319 | TGAA | 3 | 97059 | 97070 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 45284892 |
| 26 | NC_020319 | CAGG | 3 | 101100 | 101111 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | 45284892 |
| 27 | NC_020319 | ATAA | 3 | 103649 | 103660 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 45284892 |
| 28 | NC_020319 | CTAT | 3 | 108665 | 108676 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 45284892 |
| 29 | NC_020319 | ATAG | 3 | 108677 | 108688 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 45284892 |
| 30 | NC_020319 | GAAT | 5 | 110901 | 110921 | 21 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284892 |
| 31 | NC_020319 | ATAG | 3 | 112183 | 112194 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 45284892 |
| 32 | NC_020319 | TCAT | 3 | 114574 | 114586 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 45284892 |
| 33 | NC_020319 | ATAG | 3 | 114680 | 114691 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 45284892 |
| 34 | NC_020319 | ATCG | 3 | 116142 | 116153 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 45284892 |
| 35 | NC_020319 | TTCG | 3 | 119303 | 119313 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 45284892 |
| 36 | NC_020319 | TTTC | 3 | 123891 | 123902 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284892 |
| 37 | NC_020319 | AGAT | 3 | 125495 | 125505 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284892 |
| 38 | NC_020319 | TTTC | 3 | 128175 | 128185 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 39 | NC_020319 | CTTT | 3 | 129089 | 129099 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284900 |
| 40 | NC_020319 | TTCT | 3 | 131325 | 131337 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 41 | NC_020319 | ATCC | 3 | 131851 | 131862 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 42 | NC_020319 | GAGG | 3 | 135065 | 135076 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 43 | NC_020319 | AGGT | 3 | 135278 | 135289 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | Non-Coding |
| 44 | NC_020319 | GATC | 3 | 138295 | 138306 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 45 | NC_020319 | ATAG | 4 | 138864 | 138879 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 46 | NC_020319 | CTAT | 4 | 138876 | 138891 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 47 | NC_020319 | TCCC | 3 | 140916 | 140926 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 45284901 |
| 48 | NC_020319 | AAAG | 3 | 146648 | 146659 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284901 |
| 49 | NC_020319 | TATC | 4 | 147438 | 147453 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 50 | NC_020319 | AAAT | 3 | 153451 | 153461 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 51 | NC_020319 | ATCT | 3 | 153472 | 153483 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 52 | NC_020319 | AAAG | 3 | 156319 | 156329 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284902 |
| 53 | NC_020319 | TATC | 3 | 158879 | 158890 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 54 | NC_020319 | TTTC | 3 | 161324 | 161335 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284902 |
| 55 | NC_020319 | ATCG | 3 | 162226 | 162237 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 56 | NC_020319 | ATAG | 4 | 162365 | 162380 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 57 | NC_020319 | CTAT | 4 | 162377 | 162392 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |