Tetra-nucleotide Imperfect Repeats of Magnolia grandiflora voucher NJ016 chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_020318 | GAAA | 3 | 226 | 237 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 2 | NC_020318 | GAAA | 3 | 338 | 349 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 3 | NC_020318 | AAGT | 3 | 1182 | 1192 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284883 |
| 4 | NC_020318 | TAGA | 3 | 4677 | 4688 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 5 | NC_020318 | ATAA | 3 | 6571 | 6581 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_020318 | TAAC | 4 | 7682 | 7697 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | Non-Coding |
| 7 | NC_020318 | ATCT | 3 | 10703 | 10714 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 8 | NC_020318 | GTTT | 3 | 11296 | 11307 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 45284884 |
| 9 | NC_020318 | AAAT | 3 | 14773 | 14784 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 10 | NC_020318 | CTTT | 3 | 17514 | 17525 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 11 | NC_020318 | TCAA | 3 | 17978 | 17989 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 45284884 |
| 12 | NC_020318 | GAAT | 3 | 23932 | 23942 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284884 |
| 13 | NC_020318 | GAAA | 3 | 27435 | 27447 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 45284884 |
| 14 | NC_020318 | TCAT | 3 | 28095 | 28105 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 15 | NC_020318 | AGCT | 3 | 28625 | 28636 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 16 | NC_020318 | TGTA | 3 | 33553 | 33564 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 17 | NC_020318 | GAAA | 3 | 36619 | 36630 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284885 |
| 18 | NC_020318 | GAAT | 3 | 40666 | 40676 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284885 |
| 19 | NC_020318 | AATG | 3 | 42514 | 42525 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 45284885 |
| 20 | NC_020318 | TTTA | 3 | 44263 | 44274 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 21 | NC_020318 | TTAA | 3 | 44785 | 44796 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 22 | NC_020318 | ATCA | 3 | 45168 | 45178 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 45284885 |
| 23 | NC_020318 | TCTT | 4 | 45657 | 45672 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 45284885 |
| 24 | NC_020318 | TCTT | 3 | 46574 | 46584 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284885 |
| 25 | NC_020318 | TAAA | 4 | 46627 | 46642 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 45284885 |
| 26 | NC_020318 | TTGA | 3 | 49368 | 49380 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 27 | NC_020318 | TTAT | 3 | 49665 | 49675 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 28 | NC_020318 | GGAA | 3 | 50668 | 50680 | 13 | 50 % | 0 % | 50 % | 0 % | 7 % | Non-Coding |
| 29 | NC_020318 | GTTT | 3 | 52850 | 52862 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 30 | NC_020318 | GAAT | 3 | 53007 | 53018 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 31 | NC_020318 | AGTC | 3 | 53201 | 53211 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 32 | NC_020318 | AATT | 3 | 53508 | 53519 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_020318 | GTTA | 3 | 60268 | 60278 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 34 | NC_020318 | TGAA | 3 | 63605 | 63615 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 35 | NC_020318 | AATG | 3 | 65224 | 65235 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 45284886 |
| 36 | NC_020318 | GAAT | 3 | 70836 | 70847 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 37 | NC_020318 | GAAT | 3 | 71067 | 71077 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 38 | NC_020318 | ATTT | 3 | 72659 | 72669 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 39 | NC_020318 | ATAA | 4 | 72762 | 72777 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 40 | NC_020318 | TTTA | 3 | 74066 | 74077 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45284883 |
| 41 | NC_020318 | TGAA | 3 | 75737 | 75747 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284883 |
| 42 | NC_020318 | TACG | 3 | 82590 | 82602 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 45284883 |
| 43 | NC_020318 | GAAA | 4 | 84643 | 84657 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | 45284883 |
| 44 | NC_020318 | AGAA | 3 | 84670 | 84681 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284883 |
| 45 | NC_020318 | CTTT | 3 | 85361 | 85373 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 45284883 |
| 46 | NC_020318 | GTTA | 3 | 86031 | 86041 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 45284883 |
| 47 | NC_020318 | ACAT | 3 | 87324 | 87335 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 45284883 |
| 48 | NC_020318 | TTCT | 3 | 89314 | 89325 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284883 |
| 49 | NC_020318 | TTCT | 3 | 91383 | 91393 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284883 |
| 50 | NC_020318 | CTTT | 3 | 92561 | 92571 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284883 |
| 51 | NC_020318 | TGAT | 3 | 94398 | 94410 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 45284883 |
| 52 | NC_020318 | AATA | 3 | 95287 | 95299 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 45284883 |
| 53 | NC_020318 | TTTC | 3 | 95349 | 95360 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284883 |
| 54 | NC_020318 | TCTA | 3 | 97384 | 97394 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45284883 |
| 55 | NC_020318 | ATCC | 3 | 106551 | 106562 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 45284888 |
| 56 | NC_020318 | TCTA | 3 | 106940 | 106951 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45284888 |
| 57 | NC_020318 | AAGG | 3 | 107078 | 107088 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 45284888 |
| 58 | NC_020318 | GAGG | 3 | 109786 | 109797 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 45284888 |
| 59 | NC_020318 | AGGT | 3 | 110003 | 110014 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 45284888 |
| 60 | NC_020318 | TAAG | 3 | 111123 | 111133 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284888 |
| 61 | NC_020318 | CTTT | 3 | 112139 | 112150 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284888 |
| 62 | NC_020318 | GGAA | 3 | 113191 | 113201 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 45284888 |
| 63 | NC_020318 | TAAA | 3 | 114406 | 114417 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 45284888 |
| 64 | NC_020318 | AATT | 4 | 114700 | 114715 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | 45284888 |
| 65 | NC_020318 | AAAT | 4 | 116677 | 116692 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 45284888 |
| 66 | NC_020318 | ACAA | 3 | 117894 | 117904 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 45284888 |
| 67 | NC_020318 | TTTG | 3 | 118090 | 118100 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 45284888 |
| 68 | NC_020318 | GAAA | 3 | 119880 | 119890 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284888 |
| 69 | NC_020318 | AATC | 3 | 126064 | 126075 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 45284888 |
| 70 | NC_020318 | TGAA | 3 | 126214 | 126224 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284888 |
| 71 | NC_020318 | TAAA | 3 | 126225 | 126235 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 45284888 |
| 72 | NC_020318 | TAAT | 3 | 130441 | 130452 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 45284888 |
| 73 | NC_020318 | CATT | 3 | 130606 | 130617 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 45284888 |
| 74 | NC_020318 | CTTT | 3 | 131492 | 131503 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284888 |
| 75 | NC_020318 | TTCC | 3 | 134180 | 134190 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 45284888 |
| 76 | NC_020318 | AAAG | 3 | 135231 | 135242 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284888 |
| 77 | NC_020318 | CTTA | 3 | 136248 | 136258 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45284888 |
| 78 | NC_020318 | CCTT | 3 | 140293 | 140303 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 45284888 |
| 79 | NC_020318 | GGAT | 3 | 140819 | 140830 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 45284888 |
| 80 | NC_020318 | ATTT | 3 | 143783 | 143794 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45284888 |
| 81 | NC_020318 | TGAA | 3 | 152020 | 152031 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 45284891 |
| 82 | NC_020318 | ATCA | 3 | 152971 | 152983 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 45284891 |
| 83 | NC_020318 | TGAT | 3 | 153066 | 153078 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 45284891 |
| 84 | NC_020318 | AAAG | 3 | 154810 | 154820 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284891 |
| 85 | NC_020318 | ATTT | 3 | 155861 | 155872 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45284891 |
| 86 | NC_020318 | AGAA | 3 | 158056 | 158067 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284891 |