Tetra-nucleotide Imperfect Repeats of Magnolia officinalis subsp. biloba voucher SC001 chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_020317 | GAAA | 3 | 327 | 338 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 2 | NC_020317 | AAGT | 3 | 1176 | 1186 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284875 |
| 3 | NC_020317 | AATA | 5 | 4429 | 4449 | 21 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 4 | NC_020317 | TAGA | 3 | 4708 | 4719 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 5 | NC_020317 | ATCT | 3 | 10761 | 10772 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 6 | NC_020317 | GTTT | 3 | 11390 | 11401 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 45284875 |
| 7 | NC_020317 | AAAT | 3 | 14875 | 14886 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_020317 | TCAA | 3 | 18066 | 18077 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 45284876 |
| 9 | NC_020317 | TTCA | 3 | 23921 | 23932 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45284876 |
| 10 | NC_020317 | GAAT | 3 | 24020 | 24030 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284876 |
| 11 | NC_020317 | GAAA | 3 | 27523 | 27535 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 45284876 |
| 12 | NC_020317 | TCAT | 3 | 28183 | 28193 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 13 | NC_020317 | AGCT | 3 | 28713 | 28724 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 14 | NC_020317 | TGAT | 3 | 29677 | 29689 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 15 | NC_020317 | TGTA | 3 | 33928 | 33939 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 16 | NC_020317 | GAAA | 3 | 36994 | 37005 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284876 |
| 17 | NC_020317 | GAAT | 3 | 41048 | 41058 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284877 |
| 18 | NC_020317 | AATG | 3 | 42896 | 42907 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 45284877 |
| 19 | NC_020317 | TTTA | 3 | 44645 | 44656 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 20 | NC_020317 | ATCA | 3 | 45526 | 45536 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 45284877 |
| 21 | NC_020317 | TCTT | 4 | 46015 | 46030 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 45284877 |
| 22 | NC_020317 | TCTT | 3 | 46932 | 46942 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284877 |
| 23 | NC_020317 | TAAA | 4 | 46985 | 47000 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 45284877 |
| 24 | NC_020317 | AAAG | 3 | 48818 | 48828 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 25 | NC_020317 | TTGA | 3 | 49776 | 49788 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 26 | NC_020317 | TTAT | 3 | 50073 | 50084 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_020317 | GGAA | 3 | 51080 | 51092 | 13 | 50 % | 0 % | 50 % | 0 % | 7 % | Non-Coding |
| 28 | NC_020317 | GTTT | 3 | 53268 | 53280 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 29 | NC_020317 | GAAT | 3 | 53425 | 53436 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 30 | NC_020317 | AGTC | 3 | 53623 | 53633 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 31 | NC_020317 | AATT | 3 | 53930 | 53941 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 32 | NC_020317 | GTTA | 3 | 60692 | 60702 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 33 | NC_020317 | TGAA | 3 | 64028 | 64038 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 34 | NC_020317 | AATG | 3 | 65642 | 65653 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 45284878 |
| 35 | NC_020317 | GAAT | 3 | 71255 | 71266 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_020317 | GAAT | 3 | 71493 | 71503 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 37 | NC_020317 | ATTT | 3 | 73089 | 73099 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 38 | NC_020317 | ATAA | 4 | 73192 | 73207 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 39 | NC_020317 | TTTA | 3 | 74496 | 74507 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45284875 |
| 40 | NC_020317 | TGAA | 3 | 76167 | 76177 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284875 |
| 41 | NC_020317 | TACG | 3 | 83017 | 83029 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 45284875 |
| 42 | NC_020317 | GAAA | 4 | 85068 | 85082 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | 45284875 |
| 43 | NC_020317 | AGAA | 3 | 85095 | 85106 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284875 |
| 44 | NC_020317 | CTTT | 3 | 85787 | 85799 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 45284875 |
| 45 | NC_020317 | GTTA | 3 | 86457 | 86467 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 45284875 |
| 46 | NC_020317 | ACAT | 3 | 87765 | 87776 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 45284875 |
| 47 | NC_020317 | TTCT | 3 | 89754 | 89765 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284875 |
| 48 | NC_020317 | TTCT | 3 | 91823 | 91833 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284875 |
| 49 | NC_020317 | TGAT | 3 | 94838 | 94850 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 45284875 |
| 50 | NC_020317 | AATA | 3 | 95727 | 95739 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 45284875 |
| 51 | NC_020317 | TTTC | 3 | 95789 | 95800 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284875 |
| 52 | NC_020317 | TCTA | 3 | 97824 | 97834 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45284875 |
| 53 | NC_020317 | AAAG | 3 | 99736 | 99746 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284875 |
| 54 | NC_020317 | ATCC | 3 | 106996 | 107007 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 45284879 |
| 55 | NC_020317 | TCTA | 3 | 107385 | 107396 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45284879 |
| 56 | NC_020317 | AAGG | 3 | 107523 | 107533 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 45284879 |
| 57 | NC_020317 | GAGG | 3 | 110194 | 110205 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 45284879 |
| 58 | NC_020317 | AGGT | 3 | 110411 | 110422 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 45284879 |
| 59 | NC_020317 | TAAG | 3 | 111531 | 111541 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284879 |
| 60 | NC_020317 | CTTT | 3 | 112549 | 112560 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284879 |
| 61 | NC_020317 | GGAA | 3 | 113595 | 113605 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 45284879 |
| 62 | NC_020317 | TAAA | 3 | 114821 | 114832 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 45284879 |
| 63 | NC_020317 | AATT | 4 | 115115 | 115130 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | 45284879 |
| 64 | NC_020317 | AAAT | 3 | 117092 | 117107 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 45284879 |
| 65 | NC_020317 | TTTG | 3 | 118503 | 118513 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 45284879 |
| 66 | NC_020317 | AATC | 3 | 126514 | 126525 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 45284879 |
| 67 | NC_020317 | TGAA | 3 | 126664 | 126674 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284879 |
| 68 | NC_020317 | ATAA | 3 | 126675 | 126686 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 45284879 |
| 69 | NC_020317 | TAAT | 3 | 130888 | 130899 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 45284879 |
| 70 | NC_020317 | CATT | 3 | 131053 | 131064 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 45284879 |
| 71 | NC_020317 | TTCC | 3 | 134687 | 134697 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 45284879 |
| 72 | NC_020317 | AATT | 3 | 135475 | 135485 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 45284879 |
| 73 | NC_020317 | AAAG | 3 | 135732 | 135743 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284879 |
| 74 | NC_020317 | CTTA | 3 | 136751 | 136761 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45284879 |
| 75 | NC_020317 | CCTT | 3 | 140759 | 140769 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 45284879 |
| 76 | NC_020317 | GGAT | 3 | 141285 | 141296 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 45284879 |
| 77 | NC_020317 | ATTT | 3 | 144252 | 144263 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45284879 |
| 78 | NC_020317 | TTCT | 3 | 148544 | 148554 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284883 |
| 79 | NC_020317 | TGAA | 3 | 152491 | 152502 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 45284883 |
| 80 | NC_020317 | ATCA | 3 | 153442 | 153454 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 45284883 |
| 81 | NC_020317 | TGAT | 3 | 153537 | 153549 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 45284883 |
| 82 | NC_020317 | ATTT | 3 | 156332 | 156343 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45284883 |
| 83 | NC_020317 | AGAA | 3 | 158527 | 158538 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284883 |
| 84 | NC_020317 | AAAG | 3 | 160082 | 160093 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |