Tetra-nucleotide Imperfect Repeats of Magnolia officinalis chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_020316 | GAAA | 3 | 326 | 337 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 2 | NC_020316 | AAGT | 3 | 1175 | 1185 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284866 |
| 3 | NC_020316 | AATA | 4 | 4437 | 4452 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 4 | NC_020316 | TAGA | 3 | 4709 | 4720 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 5 | NC_020316 | ATCT | 3 | 10761 | 10772 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 6 | NC_020316 | GTTT | 3 | 11354 | 11365 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 45284867 |
| 7 | NC_020316 | AAAT | 3 | 14840 | 14851 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_020316 | TCAA | 3 | 18035 | 18046 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 45284867 |
| 9 | NC_020316 | TTCA | 3 | 23896 | 23907 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45284867 |
| 10 | NC_020316 | GAAT | 3 | 23995 | 24005 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284867 |
| 11 | NC_020316 | GAAA | 3 | 27498 | 27510 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 45284868 |
| 12 | NC_020316 | TCAT | 3 | 28158 | 28168 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 13 | NC_020316 | AGCT | 3 | 28688 | 28699 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 14 | NC_020316 | TGAT | 3 | 29658 | 29670 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 15 | NC_020316 | TGTA | 3 | 33937 | 33948 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 16 | NC_020316 | GAAA | 3 | 37000 | 37011 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284868 |
| 17 | NC_020316 | GAAT | 3 | 41051 | 41061 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284868 |
| 18 | NC_020316 | AATG | 3 | 42899 | 42910 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 45284868 |
| 19 | NC_020316 | TTTA | 3 | 44648 | 44659 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 20 | NC_020316 | ATCA | 3 | 45530 | 45540 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 45284868 |
| 21 | NC_020316 | TCTT | 4 | 46019 | 46034 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 45284868 |
| 22 | NC_020316 | TCTT | 3 | 46936 | 46946 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284868 |
| 23 | NC_020316 | TAAA | 4 | 46989 | 47004 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 45284868 |
| 24 | NC_020316 | AAAG | 3 | 48827 | 48837 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 25 | NC_020316 | TTGA | 3 | 49788 | 49800 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 26 | NC_020316 | TTAT | 3 | 50085 | 50096 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_020316 | GGAA | 3 | 51072 | 51084 | 13 | 50 % | 0 % | 50 % | 0 % | 7 % | Non-Coding |
| 28 | NC_020316 | GTTT | 3 | 53260 | 53272 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 29 | NC_020316 | GAAT | 3 | 53417 | 53428 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 30 | NC_020316 | AGTC | 3 | 53614 | 53624 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 31 | NC_020316 | AATT | 3 | 53921 | 53932 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 32 | NC_020316 | GTTA | 3 | 60685 | 60695 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 33 | NC_020316 | TGAA | 3 | 64023 | 64033 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 34 | NC_020316 | AATG | 3 | 65643 | 65654 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 45284870 |
| 35 | NC_020316 | GAAT | 3 | 71249 | 71260 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_020316 | GAAT | 3 | 71485 | 71495 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 37 | NC_020316 | ATTT | 3 | 73083 | 73093 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 38 | NC_020316 | ATAA | 4 | 73186 | 73201 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 39 | NC_020316 | TTTA | 3 | 74494 | 74505 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45284866 |
| 40 | NC_020316 | AAAT | 3 | 75211 | 75221 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 45284866 |
| 41 | NC_020316 | TGAA | 3 | 76171 | 76181 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284866 |
| 42 | NC_020316 | TACG | 3 | 83020 | 83032 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 45284866 |
| 43 | NC_020316 | GAAA | 4 | 85078 | 85092 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | 45284866 |
| 44 | NC_020316 | AGAA | 3 | 85105 | 85116 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284866 |
| 45 | NC_020316 | CTTT | 3 | 85797 | 85809 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 45284866 |
| 46 | NC_020316 | GTTA | 3 | 86467 | 86477 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 45284866 |
| 47 | NC_020316 | ACAT | 3 | 87789 | 87800 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 45284866 |
| 48 | NC_020316 | TTCT | 3 | 89778 | 89789 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284866 |
| 49 | NC_020316 | TTCT | 3 | 91847 | 91857 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284866 |
| 50 | NC_020316 | CTTT | 3 | 93025 | 93035 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284866 |
| 51 | NC_020316 | TGAT | 3 | 94862 | 94874 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 45284866 |
| 52 | NC_020316 | AATA | 3 | 95751 | 95763 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 45284866 |
| 53 | NC_020316 | TTTC | 3 | 95813 | 95824 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284866 |
| 54 | NC_020316 | TCTA | 3 | 97848 | 97858 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45284866 |
| 55 | NC_020316 | AAAG | 3 | 99760 | 99770 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284866 |
| 56 | NC_020316 | ATCC | 3 | 107011 | 107022 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 45284871 |
| 57 | NC_020316 | TCTA | 3 | 107400 | 107411 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45284871 |
| 58 | NC_020316 | AAGG | 3 | 107538 | 107548 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 45284871 |
| 59 | NC_020316 | GAGG | 3 | 110248 | 110259 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 45284871 |
| 60 | NC_020316 | AGGT | 3 | 110465 | 110476 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 45284871 |
| 61 | NC_020316 | TAAG | 3 | 111585 | 111595 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284871 |
| 62 | NC_020316 | CTTT | 3 | 112600 | 112611 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 45284871 |
| 63 | NC_020316 | GGAA | 3 | 113646 | 113656 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 45284871 |
| 64 | NC_020316 | TAAA | 3 | 114872 | 114883 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 45284871 |
| 65 | NC_020316 | AATT | 4 | 115166 | 115181 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | 45284871 |
| 66 | NC_020316 | AAAT | 3 | 117143 | 117158 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 45284871 |
| 67 | NC_020316 | CAAA | 3 | 118590 | 118600 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 45284871 |
| 68 | NC_020316 | ATTC | 3 | 119514 | 119525 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 45284871 |
| 69 | NC_020316 | GAAA | 3 | 123518 | 123528 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284871 |
| 70 | NC_020316 | AATC | 3 | 126558 | 126569 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 45284871 |
| 71 | NC_020316 | TGAA | 3 | 126708 | 126718 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 45284871 |
| 72 | NC_020316 | ATAA | 3 | 126719 | 126730 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 45284871 |
| 73 | NC_020316 | TAAT | 3 | 130939 | 130950 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 45284871 |
| 74 | NC_020316 | CATT | 3 | 131104 | 131115 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 45284871 |
| 75 | NC_020316 | TTCC | 3 | 134738 | 134748 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 45284871 |
| 76 | NC_020316 | AATT | 3 | 135526 | 135536 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 45284871 |
| 77 | NC_020316 | AAAG | 3 | 135783 | 135794 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284871 |
| 78 | NC_020316 | CTTA | 3 | 136799 | 136809 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 45284871 |
| 79 | NC_020316 | CCTT | 3 | 140846 | 140856 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 45284871 |
| 80 | NC_020316 | GGAT | 3 | 141372 | 141383 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 45284871 |
| 81 | NC_020316 | ATTT | 3 | 144340 | 144351 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45284871 |
| 82 | NC_020316 | TTCT | 3 | 148622 | 148632 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 45284874 |
| 83 | NC_020316 | TGAA | 3 | 152569 | 152580 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 45284874 |
| 84 | NC_020316 | ATCA | 3 | 153520 | 153532 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 45284874 |
| 85 | NC_020316 | TGAT | 3 | 153615 | 153627 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 45284874 |
| 86 | NC_020316 | AAAG | 3 | 155359 | 155369 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 45284874 |
| 87 | NC_020316 | ATTT | 3 | 156410 | 156421 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 45284874 |
| 88 | NC_020316 | AGAA | 3 | 158605 | 158616 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 45284874 |
| 89 | NC_020316 | AAAG | 3 | 160160 | 160171 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |