Hexa-nucleotide Imperfect Repeats of Quercus rubra plastid
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020152 | AAATAA | 4 | 18536 | 18559 | 24 | 83.33 % | 16.67 % | 0 % | 0 % | 8 % | Non-Coding |
2 | NC_020152 | TAATGA | 3 | 31078 | 31094 | 17 | 50 % | 33.33 % | 16.67 % | 0 % | 5 % | Non-Coding |
3 | NC_020152 | AAGTAT | 3 | 33071 | 33087 | 17 | 50 % | 33.33 % | 16.67 % | 0 % | 5 % | Non-Coding |
4 | NC_020152 | ATTCAT | 3 | 34708 | 34725 | 18 | 33.33 % | 50 % | 0 % | 16.67 % | 5 % | Non-Coding |
5 | NC_020152 | TCTTTA | 3 | 55857 | 55874 | 18 | 16.67 % | 66.67 % | 0 % | 16.67 % | 5 % | 44326731 |
6 | NC_020152 | CAATTA | 3 | 63178 | 63195 | 18 | 50 % | 33.33 % | 0 % | 16.67 % | 5 % | 44326731 |
7 | NC_020152 | TAAAGT | 3 | 71169 | 71185 | 17 | 50 % | 33.33 % | 16.67 % | 0 % | 5 % | Non-Coding |
8 | NC_020152 | CTATTA | 3 | 78399 | 78416 | 18 | 33.33 % | 50 % | 0 % | 16.67 % | 5 % | 44326728 |
9 | NC_020152 | CTAATT | 3 | 100058 | 100076 | 19 | 33.33 % | 50 % | 0 % | 16.67 % | 5 % | 44326728 |
10 | NC_020152 | TTTGTT | 3 | 103710 | 103728 | 19 | 0 % | 83.33 % | 16.67 % | 0 % | 10 % | 44326728 |
11 | NC_020152 | TATTAG | 5 | 105514 | 105542 | 29 | 33.33 % | 50 % | 16.67 % | 0 % | 6 % | 44326733 |
12 | NC_020152 | TTAACA | 3 | 120656 | 120672 | 17 | 50 % | 33.33 % | 0 % | 16.67 % | 5 % | 44326733 |
13 | NC_020152 | ATATTA | 4 | 125128 | 125151 | 24 | 50 % | 50 % | 0 % | 0 % | 8 % | 44326733 |
14 | NC_020152 | ACTAAT | 5 | 146303 | 146331 | 29 | 50 % | 33.33 % | 0 % | 16.67 % | 6 % | 44326733 |