Tri-nucleotide Imperfect Repeats of Quercus rubra plastid
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020152 | ATG | 4 | 7725 | 7736 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | Non-Coding |
2 | NC_020152 | ATT | 4 | 10152 | 10162 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
3 | NC_020152 | TTA | 5 | 17599 | 17614 | 16 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | Non-Coding |
4 | NC_020152 | TTA | 4 | 18505 | 18517 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
5 | NC_020152 | GTT | 4 | 25820 | 25831 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 44326729 |
6 | NC_020152 | TTA | 4 | 29937 | 29948 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
7 | NC_020152 | TAA | 4 | 31731 | 31741 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
8 | NC_020152 | AAT | 4 | 32325 | 32335 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
9 | NC_020152 | CTA | 4 | 35741 | 35752 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | Non-Coding |
10 | NC_020152 | TTA | 4 | 35814 | 35825 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
11 | NC_020152 | TAA | 4 | 35942 | 35953 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 0 % | Non-Coding |
12 | NC_020152 | TAT | 5 | 35987 | 36000 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
13 | NC_020152 | ATA | 4 | 40977 | 40988 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
14 | NC_020152 | TAT | 4 | 40996 | 41007 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
15 | NC_020152 | ATG | 4 | 43606 | 43616 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 44326730 |
16 | NC_020152 | GCA | 4 | 45504 | 45515 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 44326730 |
17 | NC_020152 | ATA | 4 | 47380 | 47391 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
18 | NC_020152 | TAT | 4 | 56622 | 56633 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
19 | NC_020152 | GCT | 4 | 61933 | 61945 | 13 | 0 % | 33.33 % | 33.33 % | 33.33 % | 7 % | 44326731 |
20 | NC_020152 | ATT | 4 | 64188 | 64199 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 44326731 |
21 | NC_020152 | TAT | 4 | 65142 | 65153 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
22 | NC_020152 | TAT | 5 | 65295 | 65308 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
23 | NC_020152 | GTA | 4 | 70615 | 70625 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | Non-Coding |
24 | NC_020152 | AGA | 4 | 76901 | 76911 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 44326728 |
25 | NC_020152 | TCT | 4 | 79937 | 79948 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 44326728 |
26 | NC_020152 | ATA | 6 | 88027 | 88045 | 19 | 66.67 % | 33.33 % | 0 % | 0 % | 5 % | 44326728 |
27 | NC_020152 | CTT | 4 | 90655 | 90666 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 44326728 |
28 | NC_020152 | GAT | 4 | 91123 | 91133 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 44326728 |
29 | NC_020152 | GAT | 4 | 92534 | 92544 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 44326728 |
30 | NC_020152 | GAT | 4 | 95582 | 95593 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 44326728 |
31 | NC_020152 | CTT | 4 | 109321 | 109333 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 44326733 |
32 | NC_020152 | AAG | 4 | 117827 | 117838 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 44326733 |
33 | NC_020152 | TCT | 5 | 118691 | 118705 | 15 | 0 % | 66.67 % | 0 % | 33.33 % | 6 % | 44326733 |
34 | NC_020152 | ATA | 4 | 123792 | 123802 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 44326733 |
35 | NC_020152 | TCT | 4 | 128007 | 128018 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 0 % | 44326733 |
36 | NC_020152 | TAT | 4 | 128100 | 128111 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 44326733 |
37 | NC_020152 | TAA | 4 | 130446 | 130457 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 44326733 |
38 | NC_020152 | CTT | 4 | 131233 | 131244 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 44326733 |
39 | NC_020152 | TCT | 4 | 133222 | 133232 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 44326733 |
40 | NC_020152 | ATA | 4 | 133438 | 133451 | 14 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 44326733 |
41 | NC_020152 | TTA | 4 | 134438 | 134449 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 44326733 |
42 | NC_020152 | ATT | 4 | 135019 | 135030 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 0 % | 44326733 |
43 | NC_020152 | ATC | 4 | 156253 | 156264 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 44326737 |
44 | NC_020152 | ATC | 4 | 159302 | 159312 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | Non-Coding |
45 | NC_020152 | ATC | 4 | 160713 | 160723 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 44326737 |
46 | NC_020152 | GAA | 5 | 161179 | 161193 | 15 | 66.67 % | 0 % | 33.33 % | 0 % | 6 % | 44326737 |