Tetra-nucleotide Imperfect Repeats of Ophioglossum californicum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_020147 | GGGA | 3 | 514 | 525 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 44326720 |
| 2 | NC_020147 | ACAT | 3 | 1299 | 1310 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 44326720 |
| 3 | NC_020147 | GCAT | 3 | 2957 | 2968 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 44326720 |
| 4 | NC_020147 | GAAC | 3 | 3370 | 3380 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 44326720 |
| 5 | NC_020147 | TTAA | 3 | 6134 | 6146 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 44326720 |
| 6 | NC_020147 | AAAT | 3 | 8518 | 8529 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 44326720 |
| 7 | NC_020147 | GGAA | 3 | 13432 | 13443 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 44326720 |
| 8 | NC_020147 | GATC | 3 | 14396 | 14407 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 44326720 |
| 9 | NC_020147 | GTAA | 3 | 15164 | 15174 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 44326720 |
| 10 | NC_020147 | ATGG | 3 | 17527 | 17538 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 44326720 |
| 11 | NC_020147 | GGAA | 3 | 19644 | 19656 | 13 | 50 % | 0 % | 50 % | 0 % | 7 % | 44326720 |
| 12 | NC_020147 | ATTC | 3 | 31728 | 31739 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 44326720 |
| 13 | NC_020147 | ACGG | 3 | 33162 | 33174 | 13 | 25 % | 0 % | 50 % | 25 % | 7 % | 44326720 |
| 14 | NC_020147 | ATTT | 3 | 37072 | 37083 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 44326720 |
| 15 | NC_020147 | GTAT | 3 | 38505 | 38516 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 44326720 |
| 16 | NC_020147 | AATA | 3 | 40088 | 40098 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 44326720 |
| 17 | NC_020147 | GGAT | 3 | 46998 | 47008 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 44326720 |
| 18 | NC_020147 | GGAT | 3 | 47412 | 47422 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 44326720 |
| 19 | NC_020147 | AAAT | 3 | 49112 | 49124 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 44326720 |
| 20 | NC_020147 | CTTT | 3 | 50462 | 50472 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 44326720 |
| 21 | NC_020147 | GATA | 3 | 63164 | 63174 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 44326720 |
| 22 | NC_020147 | TCCA | 3 | 64948 | 64959 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 44326720 |
| 23 | NC_020147 | CATT | 3 | 67254 | 67264 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 44326720 |
| 24 | NC_020147 | TCAT | 3 | 73007 | 73018 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 44326720 |
| 25 | NC_020147 | TCAC | 3 | 73348 | 73359 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 44326720 |
| 26 | NC_020147 | AATT | 3 | 74528 | 74539 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 44326720 |
| 27 | NC_020147 | ATGA | 3 | 75847 | 75858 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 44326720 |
| 28 | NC_020147 | CAAA | 3 | 80778 | 80789 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 44326720 |
| 29 | NC_020147 | TTTG | 3 | 81323 | 81333 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 44326720 |
| 30 | NC_020147 | TAGA | 3 | 82339 | 82349 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 44326720 |
| 31 | NC_020147 | AAAT | 3 | 83898 | 83908 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 44326725 |
| 32 | NC_020147 | AGGG | 3 | 83972 | 83983 | 12 | 25 % | 0 % | 75 % | 0 % | 0 % | 44326725 |
| 33 | NC_020147 | AAAT | 3 | 84834 | 84844 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 34 | NC_020147 | ATAA | 3 | 86806 | 86817 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 35 | NC_020147 | GGAG | 3 | 89594 | 89605 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 44326725 |
| 36 | NC_020147 | AATA | 3 | 91067 | 91078 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 44326725 |
| 37 | NC_020147 | TTTC | 3 | 98216 | 98227 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 44326726 |
| 38 | NC_020147 | ATCT | 3 | 98354 | 98365 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 44326726 |
| 39 | NC_020147 | CCCT | 3 | 99267 | 99278 | 12 | 0 % | 25 % | 0 % | 75 % | 8 % | Non-Coding |
| 40 | NC_020147 | ATCC | 3 | 102227 | 102238 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 41 | NC_020147 | GAGG | 3 | 105377 | 105388 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 42 | NC_020147 | AGGT | 3 | 105590 | 105601 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | Non-Coding |
| 43 | NC_020147 | GAGG | 3 | 106979 | 106991 | 13 | 25 % | 0 % | 75 % | 0 % | 7 % | Non-Coding |
| 44 | NC_020147 | ATTT | 3 | 111868 | 111879 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 45 | NC_020147 | ATTT | 3 | 112368 | 112380 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 46 | NC_020147 | TTCG | 3 | 116045 | 116056 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 44326727 |
| 47 | NC_020147 | TTCA | 3 | 116411 | 116422 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 44326727 |
| 48 | NC_020147 | AATT | 3 | 117133 | 117144 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 49 | NC_020147 | CCCA | 3 | 117457 | 117468 | 12 | 25 % | 0 % | 0 % | 75 % | 8 % | 44326727 |
| 50 | NC_020147 | TCAT | 3 | 118208 | 118220 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 44326727 |
| 51 | NC_020147 | ATTG | 3 | 120412 | 120423 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 44326728 |
| 52 | NC_020147 | TCGA | 3 | 122198 | 122209 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 44326728 |
| 53 | NC_020147 | TGAA | 4 | 123486 | 123500 | 15 | 50 % | 25 % | 25 % | 0 % | 6 % | 44326728 |
| 54 | NC_020147 | CTAA | 3 | 124069 | 124080 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 44326728 |
| 55 | NC_020147 | TAAT | 3 | 125278 | 125290 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 44326728 |
| 56 | NC_020147 | CTAC | 3 | 131726 | 131737 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | Non-Coding |
| 57 | NC_020147 | GGAT | 3 | 135091 | 135102 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 58 | NC_020147 | AGGG | 3 | 138051 | 138062 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |