Penta-nucleotide Imperfect Repeats of Equisetum hyemale chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020146 | TCAAC | 3 | 7222 | 7235 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | 44332961 |
2 | NC_020146 | GAAAA | 3 | 7257 | 7271 | 15 | 80 % | 0 % | 20 % | 0 % | 0 % | 44332961 |
3 | NC_020146 | AGAAA | 3 | 19325 | 19339 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
4 | NC_020146 | TCCCC | 3 | 20156 | 20170 | 15 | 0 % | 20 % | 0 % | 80 % | 6 % | Non-Coding |
5 | NC_020146 | TTTTA | 3 | 29097 | 29110 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | 44332962 |
6 | NC_020146 | CTAAA | 3 | 33087 | 33101 | 15 | 60 % | 20 % | 0 % | 20 % | 6 % | 44332962 |
7 | NC_020146 | TAAAA | 3 | 44126 | 44140 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
8 | NC_020146 | TAAAA | 4 | 44446 | 44464 | 19 | 80 % | 20 % | 0 % | 0 % | 10 % | Non-Coding |
9 | NC_020146 | CAAAT | 5 | 48919 | 48942 | 24 | 60 % | 20 % | 0 % | 20 % | 8 % | Non-Coding |
10 | NC_020146 | TTTAT | 3 | 61424 | 61438 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
11 | NC_020146 | GAAAA | 3 | 69117 | 69131 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 44332964 |
12 | NC_020146 | GAAAA | 3 | 70443 | 70456 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | 44332964 |
13 | NC_020146 | AAAAT | 3 | 76936 | 76949 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 44332966 |
14 | NC_020146 | AAACA | 3 | 100611 | 100624 | 14 | 80 % | 0 % | 0 % | 20 % | 7 % | Non-Coding |
15 | NC_020146 | TTGAT | 3 | 108790 | 108804 | 15 | 20 % | 60 % | 20 % | 0 % | 6 % | 44332968 |
16 | NC_020146 | TGTTT | 3 | 123717 | 123730 | 14 | 0 % | 80 % | 20 % | 0 % | 7 % | Non-Coding |