Tetra-nucleotide Imperfect Repeats of Tectona grandis chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_020098 | AAGT | 3 | 1143 | 1153 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 44274294 |
| 2 | NC_020098 | TTTA | 3 | 3792 | 3802 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 3 | NC_020098 | CATT | 3 | 4071 | 4082 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 4 | NC_020098 | AAAG | 3 | 4536 | 4547 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 5 | NC_020098 | GAAA | 3 | 4758 | 4768 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 6 | NC_020098 | AACA | 3 | 6223 | 6235 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 44274294 |
| 7 | NC_020098 | CTTT | 4 | 7861 | 7876 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 8 | NC_020098 | GATT | 3 | 9113 | 9125 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 9 | NC_020098 | GTCT | 3 | 11661 | 11672 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 44274294 |
| 10 | NC_020098 | ATGA | 3 | 12792 | 12804 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 44274294 |
| 11 | NC_020098 | ATTT | 3 | 14752 | 14762 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_020098 | CGTT | 3 | 19435 | 19446 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 44274295 |
| 13 | NC_020098 | GAAT | 3 | 23299 | 23309 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 44274295 |
| 14 | NC_020098 | ATTT | 3 | 23625 | 23636 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 44274295 |
| 15 | NC_020098 | CCTA | 3 | 25146 | 25156 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 44274295 |
| 16 | NC_020098 | AAAG | 3 | 31192 | 31203 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 17 | NC_020098 | TCTA | 3 | 32896 | 32907 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 18 | NC_020098 | GAAA | 3 | 35195 | 35206 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 44274295 |
| 19 | NC_020098 | ATTT | 3 | 42802 | 42813 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 20 | NC_020098 | ATTT | 3 | 43286 | 43297 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 21 | NC_020098 | TTTA | 3 | 46373 | 46384 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 22 | NC_020098 | ATTC | 3 | 47275 | 47287 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 23 | NC_020098 | CATA | 3 | 49384 | 49394 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 24 | NC_020098 | GATT | 3 | 51675 | 51686 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 25 | NC_020098 | ATTT | 3 | 51864 | 51875 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 26 | NC_020098 | TAAA | 3 | 51989 | 51999 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 27 | NC_020098 | GATC | 3 | 52438 | 52450 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | Non-Coding |
| 28 | NC_020098 | TATT | 3 | 56032 | 56042 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 29 | NC_020098 | TGCA | 3 | 57341 | 57353 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 44274297 |
| 30 | NC_020098 | GTTA | 4 | 58246 | 58260 | 15 | 25 % | 50 % | 25 % | 0 % | 6 % | Non-Coding |
| 31 | NC_020098 | CCTT | 3 | 60051 | 60062 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | 44274297 |
| 32 | NC_020098 | AGCA | 3 | 60115 | 60126 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | Non-Coding |
| 33 | NC_020098 | TTTC | 3 | 60397 | 60408 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 34 | NC_020098 | TTTC | 3 | 66460 | 66471 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 35 | NC_020098 | GAAA | 3 | 69081 | 69092 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 44274298 |
| 36 | NC_020098 | AAAC | 5 | 69244 | 69264 | 21 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 37 | NC_020098 | ATTT | 3 | 71199 | 71209 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 44332961 |
| 38 | NC_020098 | ATAA | 3 | 71583 | 71593 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 44332961 |
| 39 | NC_020098 | TTTC | 3 | 72126 | 72136 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 44332961 |
| 40 | NC_020098 | GGTT | 3 | 74760 | 74771 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 44332961 |
| 41 | NC_020098 | AAAT | 3 | 82486 | 82496 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 44332961 |
| 42 | NC_020098 | GTTC | 3 | 83273 | 83284 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 44332961 |
| 43 | NC_020098 | TTTC | 3 | 83528 | 83539 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 44332961 |
| 44 | NC_020098 | CAAT | 3 | 83986 | 83996 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 44332961 |
| 45 | NC_020098 | AATA | 3 | 92925 | 92937 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 44332961 |
| 46 | NC_020098 | ATCC | 3 | 103199 | 103210 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 47 | NC_020098 | TCTA | 3 | 103594 | 103605 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 48 | NC_020098 | AAGG | 3 | 103733 | 103743 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
| 49 | NC_020098 | TTAT | 4 | 104998 | 105012 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 50 | NC_020098 | AGGT | 3 | 106687 | 106698 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 51 | NC_020098 | TAAG | 3 | 107807 | 107817 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 52 | NC_020098 | ATTT | 3 | 108846 | 108856 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 53 | NC_020098 | GGAA | 3 | 109842 | 109852 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
| 54 | NC_020098 | ACTT | 3 | 113991 | 114002 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 55 | NC_020098 | GAAA | 3 | 115921 | 115932 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 44274301 |
| 56 | NC_020098 | ACCA | 3 | 119306 | 119317 | 12 | 50 % | 0 % | 0 % | 50 % | 0 % | Non-Coding |
| 57 | NC_020098 | AATC | 3 | 121251 | 121262 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 44274301 |
| 58 | NC_020098 | ATGC | 3 | 122769 | 122779 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 44274301 |
| 59 | NC_020098 | TCAA | 3 | 123748 | 123760 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 60 | NC_020098 | CATT | 3 | 125750 | 125761 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 44274302 |
| 61 | NC_020098 | TTCC | 3 | 129420 | 129430 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 44274302 |
| 62 | NC_020098 | ATAA | 4 | 130414 | 130428 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 63 | NC_020098 | CTTA | 3 | 131455 | 131465 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 64 | NC_020098 | CCTT | 3 | 135529 | 135539 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 65 | NC_020098 | GGAT | 3 | 136062 | 136073 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 66 | NC_020098 | TATT | 3 | 146335 | 146347 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 44274302 |
| 67 | NC_020098 | TGAT | 3 | 147367 | 147379 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 44274302 |
| 68 | NC_020098 | TTTG | 3 | 150883 | 150893 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 44274302 |