Penta-nucleotide Imperfect Repeats of Camellia sinensis chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020019 | TCTCT | 3 | 5241 | 5254 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 43585635 |
2 | NC_020019 | GATAA | 3 | 8457 | 8471 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
3 | NC_020019 | TAAAA | 3 | 18656 | 18669 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 43585636 |
4 | NC_020019 | GAATG | 3 | 19889 | 19903 | 15 | 40 % | 20 % | 40 % | 0 % | 6 % | 43585636 |
5 | NC_020019 | CTAAA | 4 | 48303 | 48323 | 21 | 60 % | 20 % | 0 % | 20 % | 9 % | Non-Coding |
6 | NC_020019 | TGAAT | 4 | 48726 | 48745 | 20 | 40 % | 40 % | 20 % | 0 % | 10 % | Non-Coding |
7 | NC_020019 | AAATA | 3 | 64719 | 64732 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 43585638 |
8 | NC_020019 | ATATG | 3 | 88604 | 88618 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 43585635 |
9 | NC_020019 | TCCGG | 3 | 96930 | 96944 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 43585635 |
10 | NC_020019 | TTTCG | 3 | 99519 | 99532 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | 43585635 |
11 | NC_020019 | TTATT | 3 | 101356 | 101369 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | 43585639 |
12 | NC_020019 | AATTT | 3 | 115416 | 115430 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | 43585639 |
13 | NC_020019 | ATTTT | 3 | 123155 | 123168 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | 43585639 |
14 | NC_020019 | AATTT | 3 | 126592 | 126605 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 43585639 |
15 | NC_020019 | TTTTA | 3 | 128594 | 128607 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | 43585639 |
16 | NC_020019 | TTTTA | 3 | 129105 | 129118 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | 43585639 |
17 | NC_020019 | TTTTG | 3 | 129147 | 129160 | 14 | 0 % | 80 % | 20 % | 0 % | 7 % | 43585639 |
18 | NC_020019 | ACCGG | 3 | 146802 | 146816 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
19 | NC_020019 | CATAC | 3 | 147784 | 147797 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | 43585643 |