Tri-nucleotide Imperfect Repeats of Camellia sinensis chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020019 | CAG | 4 | 1053 | 1064 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 43585635 |
2 | NC_020019 | GAA | 4 | 4761 | 4772 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | Non-Coding |
3 | NC_020019 | CTT | 4 | 9332 | 9342 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | Non-Coding |
4 | NC_020019 | ATT | 4 | 10257 | 10267 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
5 | NC_020019 | GTT | 4 | 24573 | 24584 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 43585636 |
6 | NC_020019 | TCA | 4 | 26921 | 26931 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 43585636 |
7 | NC_020019 | CAG | 4 | 29209 | 29220 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | Non-Coding |
8 | NC_020019 | ATG | 4 | 40564 | 40574 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 43585637 |
9 | NC_020019 | GCA | 4 | 42462 | 42473 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 43585637 |
10 | NC_020019 | ATA | 4 | 56388 | 56400 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 43585638 |
11 | NC_020019 | TAA | 4 | 56986 | 56996 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
12 | NC_020019 | TTG | 4 | 57093 | 57103 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | Non-Coding |
13 | NC_020019 | TTA | 4 | 58914 | 58926 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
14 | NC_020019 | ATT | 4 | 60648 | 60658 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
15 | NC_020019 | AGA | 5 | 61076 | 61089 | 14 | 66.67 % | 0 % | 33.33 % | 0 % | 7 % | Non-Coding |
16 | NC_020019 | TTA | 4 | 61267 | 61277 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
17 | NC_020019 | ATA | 4 | 61332 | 61343 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
18 | NC_020019 | TCT | 4 | 62514 | 62525 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | Non-Coding |
19 | NC_020019 | TTA | 5 | 68051 | 68064 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
20 | NC_020019 | ATA | 4 | 69308 | 69319 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
21 | NC_020019 | TAA | 4 | 69796 | 69807 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
22 | NC_020019 | TAT | 4 | 69934 | 69946 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
23 | NC_020019 | TAT | 4 | 70000 | 70012 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
24 | NC_020019 | TCT | 4 | 70087 | 70098 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | Non-Coding |
25 | NC_020019 | ATA | 4 | 74603 | 74613 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 43585635 |
26 | NC_020019 | TCT | 4 | 76308 | 76319 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 43585635 |
27 | NC_020019 | GAT | 4 | 77706 | 77716 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 43585635 |
28 | NC_020019 | AAT | 4 | 77838 | 77849 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 43585635 |
29 | NC_020019 | TCT | 4 | 80736 | 80747 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 43585635 |
30 | NC_020019 | CTT | 4 | 86803 | 86814 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 43585635 |
31 | NC_020019 | GAT | 4 | 87270 | 87280 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 43585635 |
32 | NC_020019 | GAT | 4 | 91695 | 91706 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 43585635 |
33 | NC_020019 | TGA | 4 | 93419 | 93430 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 43585635 |
34 | NC_020019 | GAA | 5 | 111817 | 111831 | 15 | 66.67 % | 0 % | 33.33 % | 0 % | 6 % | 43585639 |
35 | NC_020019 | TAA | 4 | 113451 | 113462 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 43585639 |
36 | NC_020019 | AAG | 4 | 114190 | 114201 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 43585639 |
37 | NC_020019 | GAA | 4 | 114951 | 114962 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 43585639 |
38 | NC_020019 | TTC | 5 | 122734 | 122748 | 15 | 0 % | 66.67 % | 0 % | 33.33 % | 6 % | 43585639 |
39 | NC_020019 | ATA | 4 | 123103 | 123115 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 43585639 |
40 | NC_020019 | AAT | 4 | 128676 | 128687 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 43585639 |
41 | NC_020019 | TCT | 4 | 129773 | 129783 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 43585639 |
42 | NC_020019 | TTC | 6 | 131912 | 131930 | 19 | 0 % | 66.67 % | 0 % | 33.33 % | 10 % | 43585639 |
43 | NC_020019 | GAA | 4 | 142203 | 142214 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 43585639 |
44 | NC_020019 | ATC | 4 | 152041 | 152052 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 43585643 |
45 | NC_020019 | ATC | 4 | 155090 | 155100 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | Non-Coding |
46 | NC_020019 | ATC | 4 | 156467 | 156477 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 43585643 |
47 | NC_020019 | GAA | 5 | 156932 | 156946 | 15 | 66.67 % | 0 % | 33.33 % | 0 % | 6 % | 43585643 |