Penta-nucleotide Imperfect Repeats of Nannochloropsis gaditana chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020014 | TTTAT | 3 | 8562 | 8575 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
2 | NC_020014 | ATATA | 3 | 8588 | 8602 | 15 | 60 % | 40 % | 0 % | 0 % | 6 % | Non-Coding |
3 | NC_020014 | ATTTT | 3 | 37631 | 37644 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
4 | NC_020014 | CTTAT | 3 | 39666 | 39679 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 43585613 |
5 | NC_020014 | AAAAC | 3 | 40700 | 40713 | 14 | 80 % | 0 % | 0 % | 20 % | 7 % | 43585613 |
6 | NC_020014 | AAAAT | 4 | 43004 | 43022 | 19 | 80 % | 20 % | 0 % | 0 % | 10 % | Non-Coding |
7 | NC_020014 | ATTTT | 3 | 43023 | 43036 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
8 | NC_020014 | ATTTT | 4 | 53797 | 53816 | 20 | 20 % | 80 % | 0 % | 0 % | 10 % | 43585618 |
9 | NC_020014 | TTTTC | 3 | 57692 | 57706 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 43585616 |
10 | NC_020014 | TCGGT | 3 | 68503 | 68516 | 14 | 0 % | 40 % | 40 % | 20 % | 7 % | 43585614 |
11 | NC_020014 | TTTTA | 3 | 71928 | 71941 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
12 | NC_020014 | TTTAA | 3 | 73345 | 73358 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
13 | NC_020014 | TGTAC | 3 | 75918 | 75931 | 14 | 20 % | 40 % | 20 % | 20 % | 7 % | 43585613 |
14 | NC_020014 | TAGTT | 3 | 81505 | 81518 | 14 | 20 % | 60 % | 20 % | 0 % | 7 % | 43585612 |
15 | NC_020014 | TAATA | 3 | 92798 | 92811 | 14 | 60 % | 40 % | 0 % | 0 % | 7 % | 43585612 |
16 | NC_020014 | TTAAA | 3 | 106694 | 106707 | 14 | 60 % | 40 % | 0 % | 0 % | 7 % | Non-Coding |
17 | NC_020014 | ATAAA | 3 | 109340 | 109354 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |