All Imperfect Repeats of Nannochloropsis gaditana chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020014 | TGG | 4 | 1975 | 1985 | 11 | 0 % | 33.33 % | 66.67 % | 0 % | 9 % | 43585617 |
2 | NC_020014 | TGTT | 3 | 2002 | 2012 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 43585619 |
3 | NC_020014 | CAA | 4 | 2630 | 2641 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 43585612 |
4 | NC_020014 | ACTT | 3 | 3968 | 3979 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 43585612 |
5 | NC_020014 | TCCA | 3 | 4106 | 4118 | 13 | 25 % | 25 % | 0 % | 50 % | 7 % | 43585612 |
6 | NC_020014 | TAAA | 3 | 7372 | 7382 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 43585620 |
7 | NC_020014 | TCT | 4 | 8039 | 8050 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 43585622 |
8 | NC_020014 | TTTAT | 3 | 8562 | 8575 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
9 | NC_020014 | ATATA | 3 | 8588 | 8602 | 15 | 60 % | 40 % | 0 % | 0 % | 6 % | Non-Coding |
10 | NC_020014 | A | 13 | 9049 | 9061 | 13 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
11 | NC_020014 | ATA | 4 | 9692 | 9703 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 43585617 |
12 | NC_020014 | ATT | 4 | 11097 | 11108 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 43585617 |
13 | NC_020014 | TAAT | 3 | 12139 | 12150 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
14 | NC_020014 | TGAC | 3 | 13776 | 13786 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 43585612 |
15 | NC_020014 | TTC | 4 | 13849 | 13860 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 43585612 |
16 | NC_020014 | ATT | 4 | 14048 | 14058 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 43585612 |
17 | NC_020014 | TTGA | 3 | 14089 | 14100 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 43585612 |
18 | NC_020014 | AAT | 4 | 15019 | 15030 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 43585612 |
19 | NC_020014 | ATTT | 3 | 17010 | 17020 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 43585623 |
20 | NC_020014 | TTAT | 3 | 18651 | 18662 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
21 | NC_020014 | TGA | 4 | 18871 | 18882 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 43585619 |
22 | NC_020014 | CTT | 4 | 19805 | 19817 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 43585614 |
23 | NC_020014 | GTT | 5 | 19990 | 20004 | 15 | 0 % | 66.67 % | 33.33 % | 0 % | 6 % | 43585614 |
24 | NC_020014 | TCA | 4 | 20350 | 20361 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 0 % | 43585614 |
25 | NC_020014 | TTGT | 3 | 21276 | 21286 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 43585617 |
26 | NC_020014 | AAT | 4 | 22265 | 22276 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 43585618 |
27 | NC_020014 | TAT | 4 | 22484 | 22494 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 43585617 |
28 | NC_020014 | TGTA | 3 | 22690 | 22701 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 43585617 |
29 | NC_020014 | CTTT | 3 | 22883 | 22893 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 43585617 |
30 | NC_020014 | TTAA | 3 | 23366 | 23377 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 43585613 |
31 | NC_020014 | TTCA | 3 | 27111 | 27121 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 43585616 |
32 | NC_020014 | TTCT | 3 | 30638 | 30648 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 43585620 |
33 | NC_020014 | ATTA | 3 | 31638 | 31649 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
34 | NC_020014 | AATC | 3 | 32630 | 32641 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 43585615 |
35 | NC_020014 | TAAA | 3 | 32810 | 32820 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 43585615 |
36 | NC_020014 | GTT | 4 | 34965 | 34976 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 43585612 |
37 | NC_020014 | CAAA | 3 | 35052 | 35062 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 43585612 |
38 | NC_020014 | GCTT | 3 | 36256 | 36267 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 43585612 |
39 | NC_020014 | TTAA | 3 | 36860 | 36871 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
40 | NC_020014 | ATTTT | 3 | 37631 | 37644 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
41 | NC_020014 | TTAT | 3 | 37699 | 37709 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
42 | NC_020014 | CTT | 4 | 38054 | 38066 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 43585614 |
43 | NC_020014 | GGT | 4 | 39431 | 39442 | 12 | 0 % | 33.33 % | 66.67 % | 0 % | 8 % | 43585613 |
44 | NC_020014 | TGG | 4 | 39511 | 39522 | 12 | 0 % | 33.33 % | 66.67 % | 0 % | 8 % | 43585613 |
45 | NC_020014 | CTTAT | 3 | 39666 | 39679 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 43585613 |
46 | NC_020014 | AAAAC | 3 | 40700 | 40713 | 14 | 80 % | 0 % | 0 % | 20 % | 7 % | 43585613 |
47 | NC_020014 | ATTT | 3 | 41595 | 41606 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 43585613 |
48 | NC_020014 | AAAAT | 4 | 43004 | 43022 | 19 | 80 % | 20 % | 0 % | 0 % | 10 % | Non-Coding |
49 | NC_020014 | ATTTT | 3 | 43023 | 43036 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
50 | NC_020014 | TAAA | 3 | 45529 | 45539 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 43585620 |
51 | NC_020014 | TA | 6 | 47511 | 47522 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
52 | NC_020014 | AAAAAT | 3 | 47823 | 47841 | 19 | 83.33 % | 16.67 % | 0 % | 0 % | 10 % | Non-Coding |
53 | NC_020014 | TAAA | 3 | 53074 | 53084 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 43585618 |
54 | NC_020014 | ATTTT | 4 | 53797 | 53816 | 20 | 20 % | 80 % | 0 % | 0 % | 10 % | 43585618 |
55 | NC_020014 | TTTTC | 3 | 57692 | 57706 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 43585616 |
56 | NC_020014 | ATT | 4 | 59208 | 59218 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 43585613 |
57 | NC_020014 | TCT | 5 | 59690 | 59705 | 16 | 0 % | 66.67 % | 0 % | 33.33 % | 6 % | 43585613 |
58 | NC_020014 | AATT | 3 | 60095 | 60106 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 43585613 |
59 | NC_020014 | GTAA | 3 | 60127 | 60139 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 43585613 |
60 | NC_020014 | TTAT | 3 | 60547 | 60559 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 43585613 |
61 | NC_020014 | TTTG | 3 | 62541 | 62552 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 43585616 |
62 | NC_020014 | AAT | 4 | 63390 | 63402 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
63 | NC_020014 | TTAT | 3 | 64230 | 64241 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 43585616 |
64 | NC_020014 | CT | 6 | 65235 | 65245 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
65 | NC_020014 | TCGGT | 3 | 68503 | 68516 | 14 | 0 % | 40 % | 40 % | 20 % | 7 % | 43585614 |
66 | NC_020014 | AAG | 4 | 69136 | 69147 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 43585614 |
67 | NC_020014 | TTTG | 3 | 70151 | 70162 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
68 | NC_020014 | GCT | 4 | 71018 | 71029 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 43585613 |
69 | NC_020014 | TTTTA | 3 | 71928 | 71941 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
70 | NC_020014 | TA | 7 | 72025 | 72038 | 14 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
71 | NC_020014 | AAAT | 3 | 72589 | 72600 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 43585614 |
72 | NC_020014 | TTTAA | 3 | 73345 | 73358 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
73 | NC_020014 | TGC | 4 | 73751 | 73762 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 43585615 |
74 | NC_020014 | TGTAC | 3 | 75918 | 75931 | 14 | 20 % | 40 % | 20 % | 20 % | 7 % | 43585613 |
75 | NC_020014 | TAT | 4 | 76397 | 76407 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 43585617 |
76 | NC_020014 | GCTG | 3 | 76642 | 76653 | 12 | 0 % | 25 % | 50 % | 25 % | 8 % | 43585617 |
77 | NC_020014 | TTATTT | 3 | 76741 | 76759 | 19 | 16.67 % | 83.33 % | 0 % | 0 % | 10 % | Non-Coding |
78 | NC_020014 | AAT | 5 | 77367 | 77380 | 14 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
79 | NC_020014 | ATT | 4 | 78621 | 78633 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 43585611 |
80 | NC_020014 | TAGTT | 3 | 81505 | 81518 | 14 | 20 % | 60 % | 20 % | 0 % | 7 % | 43585612 |
81 | NC_020014 | TAAA | 3 | 81742 | 81752 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 43585612 |
82 | NC_020014 | TTAT | 3 | 82472 | 82484 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 43585612 |
83 | NC_020014 | AATT | 3 | 83609 | 83620 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 43585611 |
84 | NC_020014 | ATTAAT | 3 | 85626 | 85644 | 19 | 50 % | 50 % | 0 % | 0 % | 10 % | 43585611 |
85 | NC_020014 | AAAT | 3 | 85791 | 85801 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 43585611 |
86 | NC_020014 | AAAT | 3 | 87243 | 87255 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 43585611 |
87 | NC_020014 | AAGA | 3 | 87499 | 87509 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 43585615 |
88 | NC_020014 | GTT | 4 | 87934 | 87944 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | 43585615 |
89 | NC_020014 | AAAG | 3 | 88758 | 88768 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 43585615 |
90 | NC_020014 | CAA | 4 | 92502 | 92512 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | 43585612 |
91 | NC_020014 | TAATA | 3 | 92798 | 92811 | 14 | 60 % | 40 % | 0 % | 0 % | 7 % | 43585612 |
92 | NC_020014 | TAA | 4 | 92974 | 92985 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
93 | NC_020014 | GTT | 4 | 94447 | 94458 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 43585614 |
94 | NC_020014 | TTTG | 3 | 95307 | 95317 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 43585615 |
95 | NC_020014 | CATG | 3 | 95752 | 95762 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 43585615 |
96 | NC_020014 | ATTT | 3 | 95927 | 95937 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 43585615 |
97 | NC_020014 | TAA | 5 | 97604 | 97619 | 16 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | Non-Coding |
98 | NC_020014 | CAA | 5 | 100875 | 100889 | 15 | 66.67 % | 0 % | 0 % | 33.33 % | 6 % | 43585612 |
99 | NC_020014 | TCAA | 3 | 101259 | 101270 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 43585612 |
100 | NC_020014 | AAAT | 4 | 102174 | 102189 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
101 | NC_020014 | TCT | 4 | 102600 | 102610 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 43585611 |
102 | NC_020014 | TAA | 4 | 103078 | 103088 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 43585611 |
103 | NC_020014 | AAT | 4 | 103906 | 103916 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 43585611 |
104 | NC_020014 | TTAAA | 3 | 106694 | 106707 | 14 | 60 % | 40 % | 0 % | 0 % | 7 % | Non-Coding |
105 | NC_020014 | GAA | 4 | 106762 | 106773 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | Non-Coding |
106 | NC_020014 | AC | 6 | 107538 | 107548 | 11 | 50 % | 0 % | 0 % | 50 % | 9 % | 43585617 |
107 | NC_020014 | TAA | 4 | 109045 | 109055 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 43585615 |
108 | NC_020014 | ATAAA | 3 | 109340 | 109354 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
109 | NC_020014 | TAT | 4 | 109792 | 109803 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
110 | NC_020014 | TTTA | 3 | 114870 | 114880 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |