Penta-nucleotide Imperfect Repeats of Vaccinium macrocarpon plastid
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_019616 | AATCA | 4 | 6272 | 6291 | 20 | 60 % | 20 % | 0 % | 20 % | 10 % | 42869758 |
2 | NC_019616 | TCTTT | 3 | 25274 | 25287 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 42869758 |
3 | NC_019616 | CAATA | 3 | 41415 | 41428 | 14 | 60 % | 20 % | 0 % | 20 % | 7 % | 42869758 |
4 | NC_019616 | AAAAG | 3 | 61648 | 61661 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | 42869758 |
5 | NC_019616 | AGTAG | 3 | 64538 | 64551 | 14 | 40 % | 20 % | 40 % | 0 % | 7 % | 42869758 |
6 | NC_019616 | TATTC | 3 | 69385 | 69399 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | 42869758 |
7 | NC_019616 | AATGT | 3 | 70236 | 70249 | 14 | 40 % | 40 % | 20 % | 0 % | 7 % | 42869758 |
8 | NC_019616 | GAAGA | 3 | 107965 | 107978 | 14 | 60 % | 0 % | 40 % | 0 % | 7 % | 42869758 |
9 | NC_019616 | ATAGA | 4 | 109262 | 109284 | 23 | 60 % | 20 % | 20 % | 0 % | 8 % | 42869758 |
10 | NC_019616 | ATAGA | 4 | 120075 | 120097 | 23 | 60 % | 20 % | 20 % | 0 % | 8 % | 42869758 |
11 | NC_019616 | ATAGA | 4 | 121444 | 121466 | 23 | 60 % | 20 % | 20 % | 0 % | 8 % | 42869758 |
12 | NC_019616 | AAAAT | 3 | 126252 | 126266 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 42869758 |
13 | NC_019616 | ATAGA | 4 | 130217 | 130239 | 23 | 60 % | 20 % | 20 % | 0 % | 8 % | 42869758 |
14 | NC_019616 | ATAGA | 4 | 131328 | 131350 | 23 | 60 % | 20 % | 20 % | 0 % | 8 % | 42869758 |
15 | NC_019616 | TTTAT | 3 | 143286 | 143299 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | 42869758 |
16 | NC_019616 | TCTAT | 5 | 149248 | 149270 | 23 | 20 % | 60 % | 0 % | 20 % | 8 % | 42869758 |
17 | NC_019616 | TCTAT | 5 | 150359 | 150381 | 23 | 20 % | 60 % | 0 % | 20 % | 8 % | 42869758 |
18 | NC_019616 | TCTAT | 5 | 159132 | 159154 | 23 | 20 % | 60 % | 0 % | 20 % | 8 % | 42869758 |
19 | NC_019616 | TCTAT | 5 | 160501 | 160523 | 23 | 20 % | 60 % | 0 % | 20 % | 8 % | 42869758 |
20 | NC_019616 | TCTAT | 5 | 171314 | 171336 | 23 | 20 % | 60 % | 0 % | 20 % | 8 % | 42869758 |
21 | NC_019616 | TCTCT | 3 | 172618 | 172631 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 42869758 |