Penta-nucleotide Imperfect Repeats of Fragaria virginiana chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_019602 | ATTGA | 3 | 3139 | 3152 | 14 | 40 % | 40 % | 20 % | 0 % | 7 % | 42869726 |
2 | NC_019602 | CTCTT | 4 | 4513 | 4531 | 19 | 0 % | 60 % | 0 % | 40 % | 10 % | Non-Coding |
3 | NC_019602 | ATTTT | 3 | 5423 | 5437 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | 42869726 |
4 | NC_019602 | GATAA | 3 | 7910 | 7924 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
5 | NC_019602 | GAATA | 3 | 17366 | 17379 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | 42869727 |
6 | NC_019602 | AGAAA | 3 | 25689 | 25703 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 42869727 |
7 | NC_019602 | ATTCA | 3 | 27825 | 27838 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |
8 | NC_019602 | ATTCA | 3 | 52938 | 52952 | 15 | 40 % | 40 % | 0 % | 20 % | 6 % | Non-Coding |
9 | NC_019602 | AATAA | 4 | 60086 | 60105 | 20 | 80 % | 20 % | 0 % | 0 % | 10 % | Non-Coding |
10 | NC_019602 | TATAT | 4 | 67922 | 67940 | 19 | 40 % | 60 % | 0 % | 0 % | 5 % | Non-Coding |
11 | NC_019602 | TTTAT | 4 | 69715 | 69734 | 20 | 20 % | 80 % | 0 % | 0 % | 5 % | 42869730 |
12 | NC_019602 | TTTAT | 4 | 83154 | 83174 | 21 | 20 % | 80 % | 0 % | 0 % | 9 % | 42869731 |
13 | NC_019602 | ATATG | 3 | 87506 | 87520 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 42869731 |
14 | NC_019602 | TCCGA | 3 | 91124 | 91138 | 15 | 20 % | 20 % | 20 % | 40 % | 6 % | 42869731 |
15 | NC_019602 | TCCGG | 3 | 95961 | 95975 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 42869731 |
16 | NC_019602 | ATTTT | 3 | 111528 | 111541 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | 42869730 |
17 | NC_019602 | AAAAT | 3 | 111573 | 111587 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 42869730 |
18 | NC_019602 | CTTTT | 3 | 128312 | 128326 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 42869730 |
19 | NC_019602 | ACCGG | 3 | 145232 | 145246 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
20 | NC_019602 | CATAC | 3 | 146398 | 146411 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |