Tetra-nucleotide Imperfect Repeats of Fragaria virginiana chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_019602 | AAGT | 3 | 1103 | 1113 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 42869726 |
| 2 | NC_019602 | CATA | 3 | 1950 | 1960 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 3 | NC_019602 | ATTC | 3 | 5593 | 5603 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 42869726 |
| 4 | NC_019602 | AATA | 4 | 6457 | 6473 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | Non-Coding |
| 5 | NC_019602 | TTCT | 3 | 7796 | 7806 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 42869726 |
| 6 | NC_019602 | TTAT | 3 | 8263 | 8274 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_019602 | TATT | 3 | 8887 | 8898 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_019602 | AAAT | 3 | 8900 | 8912 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 9 | NC_019602 | TTTG | 3 | 8989 | 8999 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 10 | NC_019602 | CAAT | 3 | 11737 | 11747 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 42869727 |
| 11 | NC_019602 | TGAG | 3 | 20134 | 20145 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 12 | NC_019602 | TTCA | 3 | 22071 | 22082 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 42869727 |
| 13 | NC_019602 | GAAT | 3 | 22176 | 22186 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 42869727 |
| 14 | NC_019602 | ATTC | 3 | 23083 | 23095 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 15 | NC_019602 | TCAT | 3 | 26353 | 26363 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 16 | NC_019602 | CTTT | 3 | 29203 | 29213 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 17 | NC_019602 | GTAT | 3 | 30920 | 30930 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 18 | NC_019602 | GGGA | 3 | 31296 | 31307 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 19 | NC_019602 | TCTT | 3 | 31716 | 31727 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 20 | NC_019602 | GAAA | 3 | 35040 | 35051 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 42869728 |
| 21 | NC_019602 | TTGC | 3 | 35441 | 35451 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 42869728 |
| 22 | NC_019602 | TTCC | 3 | 36096 | 36106 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 23 | NC_019602 | ATTG | 3 | 39449 | 39459 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 42869728 |
| 24 | NC_019602 | AATG | 3 | 41095 | 41106 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 42869728 |
| 25 | NC_019602 | TTTA | 3 | 43367 | 43378 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 26 | NC_019602 | AAAT | 3 | 45662 | 45672 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 27 | NC_019602 | TGAT | 3 | 48177 | 48188 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 28 | NC_019602 | TATT | 3 | 50176 | 50187 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 29 | NC_019602 | AAAT | 3 | 52205 | 52217 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 30 | NC_019602 | AAAT | 5 | 55753 | 55771 | 19 | 75 % | 25 % | 0 % | 0 % | 10 % | Non-Coding |
| 31 | NC_019602 | ATTA | 3 | 58190 | 58202 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 32 | NC_019602 | TTTC | 3 | 64055 | 64065 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 33 | NC_019602 | CTTT | 3 | 66446 | 66457 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 34 | NC_019602 | CCTC | 3 | 67204 | 67214 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | Non-Coding |
| 35 | NC_019602 | AATA | 3 | 68484 | 68494 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 36 | NC_019602 | TGTT | 3 | 68683 | 68694 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 37 | NC_019602 | TGAA | 3 | 70080 | 70091 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 38 | NC_019602 | TTTC | 3 | 70114 | 70126 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 39 | NC_019602 | TAAA | 4 | 70299 | 70313 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 40 | NC_019602 | TTAC | 3 | 71538 | 71550 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 42869731 |
| 41 | NC_019602 | TTTA | 3 | 71674 | 71685 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 42869731 |
| 42 | NC_019602 | TATT | 4 | 72732 | 72747 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 42869731 |
| 43 | NC_019602 | TGAA | 3 | 73389 | 73399 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 42869731 |
| 44 | NC_019602 | AATT | 3 | 76806 | 76817 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 42869731 |
| 45 | NC_019602 | ATTG | 3 | 78982 | 78994 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 42869731 |
| 46 | NC_019602 | ATGT | 3 | 79286 | 79297 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 42869731 |
| 47 | NC_019602 | TTTC | 3 | 81852 | 81863 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 42869731 |
| 48 | NC_019602 | CTTT | 3 | 85176 | 85188 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 42869731 |
| 49 | NC_019602 | TAAT | 3 | 85260 | 85271 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 42869731 |
| 50 | NC_019602 | AATT | 3 | 85283 | 85294 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 42869731 |
| 51 | NC_019602 | CTTT | 3 | 90427 | 90437 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 42869731 |
| 52 | NC_019602 | TGAT | 3 | 92267 | 92279 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 42869731 |
| 53 | NC_019602 | AATA | 3 | 93141 | 93153 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 42869731 |
| 54 | NC_019602 | TCAG | 3 | 95725 | 95737 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 42869731 |
| 55 | NC_019602 | CCCT | 3 | 99834 | 99844 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 42869731 |
| 56 | NC_019602 | ATCC | 3 | 104054 | 104065 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 42869730 |
| 57 | NC_019602 | TCTA | 3 | 104458 | 104469 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 42869730 |
| 58 | NC_019602 | AAGG | 3 | 104597 | 104607 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 42869730 |
| 59 | NC_019602 | GAGG | 3 | 107332 | 107343 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 42869730 |
| 60 | NC_019602 | AGGT | 3 | 107544 | 107555 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 42869730 |
| 61 | NC_019602 | TAAG | 3 | 108664 | 108674 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 42869730 |
| 62 | NC_019602 | AAAG | 3 | 111505 | 111516 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 42869730 |
| 63 | NC_019602 | ATTT | 3 | 111831 | 111841 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 42869730 |
| 64 | NC_019602 | TTAT | 3 | 120222 | 120232 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 42869730 |
| 65 | NC_019602 | AATC | 3 | 122219 | 122230 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 42869730 |
| 66 | NC_019602 | TGGG | 3 | 124196 | 124206 | 11 | 0 % | 25 % | 75 % | 0 % | 9 % | 42869730 |
| 67 | NC_019602 | TCAA | 3 | 125523 | 125533 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 42869730 |
| 68 | NC_019602 | TTAT | 3 | 125683 | 125694 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 42869730 |
| 69 | NC_019602 | ATTT | 3 | 127674 | 127686 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 42869730 |
| 70 | NC_019602 | ATTT | 3 | 127738 | 127749 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 42869730 |
| 71 | NC_019602 | CTTT | 3 | 129692 | 129703 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 42869730 |
| 72 | NC_019602 | CTAA | 3 | 131352 | 131362 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 42869730 |
| 73 | NC_019602 | CTTA | 3 | 132534 | 132544 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 42869730 |
| 74 | NC_019602 | GGAT | 3 | 137143 | 137154 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 42869730 |
| 75 | NC_019602 | ATTT | 3 | 140892 | 140904 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 42869730 |
| 76 | NC_019602 | AATA | 3 | 141005 | 141016 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 42869730 |
| 77 | NC_019602 | CTGA | 3 | 145471 | 145483 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | Non-Coding |
| 78 | NC_019602 | ATCA | 3 | 148929 | 148941 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 42869734 |
| 79 | NC_019602 | AAAG | 3 | 150771 | 150781 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 42869734 |
| 80 | NC_019602 | TATT | 3 | 151827 | 151838 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 42869734 |