Tri-nucleotide Imperfect Repeats of Fragaria virginiana chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_019602 | CAG | 4 | 997 | 1008 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 42869726 |
2 | NC_019602 | AAG | 4 | 2102 | 2113 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 42869726 |
3 | NC_019602 | AAT | 4 | 4805 | 4816 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
4 | NC_019602 | TAT | 4 | 7081 | 7093 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
5 | NC_019602 | ATA | 4 | 7578 | 7588 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
6 | NC_019602 | TAT | 4 | 10353 | 10363 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
7 | NC_019602 | TAA | 4 | 10390 | 10401 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
8 | NC_019602 | TAT | 8 | 10411 | 10434 | 24 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
9 | NC_019602 | TGT | 4 | 17565 | 17576 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 42869727 |
10 | NC_019602 | GTT | 4 | 23040 | 23051 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 42869727 |
11 | NC_019602 | TAC | 4 | 28959 | 28969 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | Non-Coding |
12 | NC_019602 | ATA | 4 | 30907 | 30917 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
13 | NC_019602 | TAA | 4 | 32297 | 32308 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
14 | NC_019602 | TAT | 4 | 32652 | 32663 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
15 | NC_019602 | AAT | 4 | 33063 | 33074 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
16 | NC_019602 | TGC | 4 | 35934 | 35945 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 42869728 |
17 | NC_019602 | TCT | 4 | 38057 | 38067 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 42869728 |
18 | NC_019602 | CAC | 4 | 41180 | 41191 | 12 | 33.33 % | 0 % | 0 % | 66.67 % | 8 % | 42869728 |
19 | NC_019602 | GCA | 4 | 41500 | 41511 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 42869728 |
20 | NC_019602 | TTA | 4 | 52777 | 52788 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
21 | NC_019602 | ATA | 4 | 55715 | 55725 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 42869729 |
22 | NC_019602 | TAT | 4 | 56190 | 56200 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
23 | NC_019602 | TTG | 4 | 58097 | 58107 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | Non-Coding |
24 | NC_019602 | ATT | 4 | 67909 | 67921 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
25 | NC_019602 | GAA | 4 | 69561 | 69572 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | Non-Coding |
26 | NC_019602 | TCC | 4 | 73167 | 73177 | 11 | 0 % | 33.33 % | 0 % | 66.67 % | 9 % | 42869731 |
27 | NC_019602 | TAT | 4 | 73454 | 73466 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 42869731 |
28 | NC_019602 | TCT | 4 | 75052 | 75063 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 42869731 |
29 | NC_019602 | TCT | 4 | 79462 | 79473 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 42869731 |
30 | NC_019602 | TTA | 4 | 85478 | 85489 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 42869731 |
31 | NC_019602 | CTT | 4 | 85693 | 85704 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 42869731 |
32 | NC_019602 | GAT | 4 | 86161 | 86171 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 42869731 |
33 | NC_019602 | TAT | 4 | 86380 | 86391 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 0 % | 42869731 |
34 | NC_019602 | GAT | 4 | 87549 | 87559 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 42869731 |
35 | NC_019602 | AAG | 4 | 101267 | 101278 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 42869730 |
36 | NC_019602 | GAA | 5 | 110590 | 110604 | 15 | 66.67 % | 0 % | 33.33 % | 0 % | 6 % | 42869730 |
37 | NC_019602 | TAA | 4 | 112220 | 112231 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 42869730 |
38 | NC_019602 | AAG | 4 | 112959 | 112970 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 42869730 |
39 | NC_019602 | TAA | 4 | 113664 | 113674 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 42869730 |
40 | NC_019602 | TTC | 5 | 121176 | 121190 | 15 | 0 % | 66.67 % | 0 % | 33.33 % | 6 % | 42869730 |
41 | NC_019602 | TAT | 4 | 121452 | 121462 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 42869730 |
42 | NC_019602 | TTA | 4 | 121538 | 121549 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 42869730 |
43 | NC_019602 | ATT | 4 | 121560 | 121570 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 42869730 |
44 | NC_019602 | TAT | 4 | 125788 | 125799 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 42869730 |
45 | NC_019602 | ATC | 4 | 127370 | 127380 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 42869730 |
46 | NC_019602 | ATA | 5 | 127658 | 127671 | 14 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 42869730 |
47 | NC_019602 | TAA | 4 | 129097 | 129108 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 42869730 |
48 | NC_019602 | TTC | 6 | 130600 | 130618 | 19 | 0 % | 66.67 % | 0 % | 33.33 % | 10 % | 42869730 |
49 | NC_019602 | CTT | 4 | 139930 | 139941 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 42869730 |
50 | NC_019602 | ATC | 4 | 150615 | 150626 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 42869734 |
51 | NC_019602 | GAA | 4 | 152126 | 152136 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 42869734 |
52 | NC_019602 | ATC | 4 | 153649 | 153659 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | Non-Coding |
53 | NC_019602 | ATA | 4 | 154817 | 154828 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 0 % | 42869734 |
54 | NC_019602 | ATC | 4 | 155037 | 155047 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 42869734 |
55 | NC_019602 | GAA | 5 | 155503 | 155517 | 15 | 66.67 % | 0 % | 33.33 % | 0 % | 6 % | 42869734 |