Tetra-nucleotide Imperfect Repeats of Fragaria chiloensis chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_019601 | AAGT | 3 | 1103 | 1113 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 42869717 |
| 2 | NC_019601 | CATA | 3 | 1950 | 1960 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 3 | NC_019601 | ATTC | 3 | 5593 | 5603 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 42869718 |
| 4 | NC_019601 | AATA | 4 | 6457 | 6473 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | Non-Coding |
| 5 | NC_019601 | TTCT | 3 | 7796 | 7806 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 42869718 |
| 6 | NC_019601 | TTAT | 3 | 8263 | 8274 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_019601 | TATT | 3 | 8887 | 8898 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_019601 | AAAT | 3 | 8900 | 8912 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 9 | NC_019601 | TTTG | 3 | 8989 | 8999 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 10 | NC_019601 | CAAT | 3 | 11737 | 11747 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 42869718 |
| 11 | NC_019601 | TGAG | 3 | 20135 | 20146 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 12 | NC_019601 | TTCA | 3 | 22072 | 22083 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 42869719 |
| 13 | NC_019601 | GAAT | 3 | 22177 | 22187 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 42869719 |
| 14 | NC_019601 | ATTC | 3 | 23084 | 23096 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 15 | NC_019601 | TCAT | 3 | 26354 | 26364 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 16 | NC_019601 | CTTT | 3 | 29204 | 29214 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 17 | NC_019601 | GTAT | 3 | 30921 | 30931 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 18 | NC_019601 | GGGA | 3 | 31297 | 31308 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 19 | NC_019601 | TCTT | 3 | 31717 | 31728 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 20 | NC_019601 | GAAA | 3 | 35041 | 35052 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 42869719 |
| 21 | NC_019601 | TTGC | 3 | 35442 | 35452 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 42869719 |
| 22 | NC_019601 | TTCC | 3 | 36097 | 36107 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 23 | NC_019601 | ATTG | 3 | 39418 | 39428 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 42869719 |
| 24 | NC_019601 | AATG | 3 | 41064 | 41075 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 42869719 |
| 25 | NC_019601 | TTTA | 3 | 43336 | 43347 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 26 | NC_019601 | AAAT | 3 | 45630 | 45640 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 27 | NC_019601 | TGAT | 3 | 48144 | 48155 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 28 | NC_019601 | TATT | 3 | 50143 | 50154 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 29 | NC_019601 | AAAT | 3 | 52172 | 52184 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 30 | NC_019601 | AAAT | 5 | 55720 | 55738 | 19 | 75 % | 25 % | 0 % | 0 % | 10 % | Non-Coding |
| 31 | NC_019601 | ATTA | 3 | 58157 | 58169 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 32 | NC_019601 | TTTC | 3 | 64010 | 64020 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 33 | NC_019601 | CTTT | 3 | 66401 | 66412 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 34 | NC_019601 | CCTC | 3 | 67159 | 67169 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | Non-Coding |
| 35 | NC_019601 | TGTT | 3 | 68644 | 68655 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_019601 | TGAA | 3 | 70040 | 70051 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 37 | NC_019601 | TTTC | 3 | 70074 | 70086 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 38 | NC_019601 | TAAA | 4 | 70259 | 70273 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 39 | NC_019601 | TTAC | 3 | 71499 | 71511 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 42869722 |
| 40 | NC_019601 | TTTA | 3 | 71635 | 71646 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 42869722 |
| 41 | NC_019601 | TATT | 4 | 72694 | 72709 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 42869722 |
| 42 | NC_019601 | TGAA | 3 | 73351 | 73361 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 42869722 |
| 43 | NC_019601 | AATT | 3 | 76787 | 76798 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 42869722 |
| 44 | NC_019601 | ATTG | 3 | 78963 | 78975 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 42869722 |
| 45 | NC_019601 | ATGT | 3 | 79267 | 79278 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 42869722 |
| 46 | NC_019601 | TTTC | 3 | 81833 | 81844 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 42869722 |
| 47 | NC_019601 | CTTT | 3 | 85157 | 85169 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 42869722 |
| 48 | NC_019601 | TAAT | 3 | 85241 | 85252 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 42869722 |
| 49 | NC_019601 | AATT | 3 | 85264 | 85275 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 42869722 |
| 50 | NC_019601 | CTTT | 3 | 90408 | 90418 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 42869722 |
| 51 | NC_019601 | TGAT | 3 | 92248 | 92260 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 42869722 |
| 52 | NC_019601 | AATA | 3 | 93122 | 93134 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 42869722 |
| 53 | NC_019601 | TCAG | 3 | 95706 | 95718 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 42869722 |
| 54 | NC_019601 | CCCT | 3 | 99815 | 99825 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 42869722 |
| 55 | NC_019601 | ATCC | 3 | 104035 | 104046 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 42869722 |
| 56 | NC_019601 | TCTA | 3 | 104439 | 104450 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 42869722 |
| 57 | NC_019601 | AAGG | 3 | 104578 | 104588 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 42869722 |
| 58 | NC_019601 | GAGG | 3 | 107313 | 107324 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 42869722 |
| 59 | NC_019601 | AGGT | 3 | 107525 | 107536 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 42869722 |
| 60 | NC_019601 | TAAG | 3 | 108645 | 108655 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 42869722 |
| 61 | NC_019601 | AAAG | 3 | 111486 | 111497 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 42869722 |
| 62 | NC_019601 | ATTT | 3 | 111812 | 111822 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 42869722 |
| 63 | NC_019601 | TTAT | 3 | 120204 | 120214 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 42869722 |
| 64 | NC_019601 | AATC | 3 | 122201 | 122212 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 42869722 |
| 65 | NC_019601 | TGGG | 3 | 124178 | 124188 | 11 | 0 % | 25 % | 75 % | 0 % | 9 % | 42869722 |
| 66 | NC_019601 | TCAA | 3 | 125505 | 125515 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 42869722 |
| 67 | NC_019601 | TTAT | 3 | 125665 | 125676 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 42869722 |
| 68 | NC_019601 | ATTT | 3 | 127656 | 127668 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 42869722 |
| 69 | NC_019601 | ATTT | 3 | 127720 | 127731 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 42869722 |
| 70 | NC_019601 | CTTT | 3 | 129674 | 129685 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 42869722 |
| 71 | NC_019601 | CTAA | 3 | 131334 | 131344 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 42869722 |
| 72 | NC_019601 | CTTA | 3 | 132516 | 132526 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 42869722 |
| 73 | NC_019601 | GGAT | 3 | 137125 | 137136 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 42869722 |
| 74 | NC_019601 | ATTT | 3 | 140874 | 140886 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 42869722 |
| 75 | NC_019601 | AATA | 3 | 140987 | 140998 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 42869722 |
| 76 | NC_019601 | CTGA | 3 | 145453 | 145465 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | Non-Coding |
| 77 | NC_019601 | ATCA | 3 | 148911 | 148923 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 42869726 |
| 78 | NC_019601 | AAAG | 3 | 150753 | 150763 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 42869726 |
| 79 | NC_019601 | TATT | 3 | 151809 | 151820 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 42869726 |