Tetra-nucleotide Imperfect Repeats of Fragaria mandshurica plastid
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_018767 | AAGT | 3 | 1069 | 1079 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 40883030 |
| 2 | NC_018767 | CATA | 3 | 1916 | 1926 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 3 | NC_018767 | ATTC | 3 | 5564 | 5574 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 4 | NC_018767 | AATA | 4 | 6440 | 6456 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | Non-Coding |
| 5 | NC_018767 | TTCT | 3 | 7787 | 7797 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 6 | NC_018767 | TTAT | 3 | 8257 | 8268 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_018767 | TATT | 3 | 8882 | 8893 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_018767 | AAAT | 3 | 8895 | 8907 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 9 | NC_018767 | TTTG | 3 | 8984 | 8994 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 10 | NC_018767 | CAAT | 3 | 11762 | 11772 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 40883030 |
| 11 | NC_018767 | TGAG | 3 | 20161 | 20172 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 12 | NC_018767 | TTCA | 3 | 22098 | 22109 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 40883031 |
| 13 | NC_018767 | GAAT | 3 | 22203 | 22213 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 40883031 |
| 14 | NC_018767 | ATTC | 3 | 23111 | 23123 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 15 | NC_018767 | TCAT | 3 | 26381 | 26391 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 16 | NC_018767 | CTTT | 3 | 27932 | 27942 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 17 | NC_018767 | CTTT | 3 | 29256 | 29266 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 18 | NC_018767 | GTAT | 3 | 30961 | 30971 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 19 | NC_018767 | GGGA | 3 | 31337 | 31348 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 20 | NC_018767 | TCTT | 3 | 31757 | 31768 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 21 | NC_018767 | GAAA | 3 | 35087 | 35098 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 40883031 |
| 22 | NC_018767 | TTGC | 3 | 35488 | 35498 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 40883031 |
| 23 | NC_018767 | TTCC | 3 | 36143 | 36153 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 24 | NC_018767 | ATTG | 3 | 39467 | 39477 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 40883031 |
| 25 | NC_018767 | AATG | 3 | 41113 | 41124 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 40883032 |
| 26 | NC_018767 | TTTA | 3 | 43385 | 43396 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_018767 | AAAT | 3 | 45680 | 45690 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 28 | NC_018767 | TGAT | 3 | 48194 | 48205 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 29 | NC_018767 | TATT | 3 | 50201 | 50212 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_018767 | AAAT | 3 | 52230 | 52242 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 31 | NC_018767 | AAAT | 5 | 55783 | 55801 | 19 | 75 % | 25 % | 0 % | 0 % | 10 % | Non-Coding |
| 32 | NC_018767 | ATTA | 3 | 58220 | 58232 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 33 | NC_018767 | TAAA | 3 | 60131 | 60142 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_018767 | TTTC | 3 | 64107 | 64117 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 35 | NC_018767 | CTTT | 3 | 66479 | 66490 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 36 | NC_018767 | CCTC | 3 | 67239 | 67249 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | Non-Coding |
| 37 | NC_018767 | TGTT | 3 | 68743 | 68754 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 38 | NC_018767 | TGAA | 3 | 70140 | 70151 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 39 | NC_018767 | TTTC | 3 | 70174 | 70186 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 40 | NC_018767 | TAAA | 4 | 70359 | 70373 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 41 | NC_018767 | TTAC | 3 | 71597 | 71609 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 40883034 |
| 42 | NC_018767 | TTTA | 3 | 71733 | 71744 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 40883034 |
| 43 | NC_018767 | TATT | 4 | 72791 | 72806 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 40883034 |
| 44 | NC_018767 | TGAA | 3 | 73448 | 73458 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 40883034 |
| 45 | NC_018767 | AATT | 3 | 76865 | 76876 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 40883034 |
| 46 | NC_018767 | ATTG | 3 | 79041 | 79053 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 40883034 |
| 47 | NC_018767 | ATGT | 3 | 79345 | 79356 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 40883034 |
| 48 | NC_018767 | TTTC | 3 | 81927 | 81938 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 40883034 |
| 49 | NC_018767 | CTTT | 3 | 85251 | 85263 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 40883034 |
| 50 | NC_018767 | TAAT | 3 | 85335 | 85346 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 40883034 |
| 51 | NC_018767 | AATT | 3 | 85358 | 85369 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 40883034 |
| 52 | NC_018767 | CTTT | 3 | 90508 | 90518 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 40883034 |
| 53 | NC_018767 | TGAT | 3 | 92348 | 92360 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 40883034 |
| 54 | NC_018767 | AATA | 3 | 93222 | 93234 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 40883034 |
| 55 | NC_018767 | TCAG | 3 | 95814 | 95826 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 40883034 |
| 56 | NC_018767 | CCCT | 3 | 99923 | 99933 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 40883034 |
| 57 | NC_018767 | ATCC | 3 | 104143 | 104154 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 58 | NC_018767 | TCTA | 3 | 104547 | 104558 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 59 | NC_018767 | AAGG | 3 | 104686 | 104696 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
| 60 | NC_018767 | GAGG | 3 | 107421 | 107432 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 61 | NC_018767 | AGGT | 3 | 107633 | 107644 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 62 | NC_018767 | TAAG | 3 | 108753 | 108763 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 63 | NC_018767 | TATT | 4 | 109799 | 109814 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 64 | NC_018767 | AAAG | 3 | 111598 | 111609 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 40883036 |
| 65 | NC_018767 | TAAA | 3 | 111690 | 111701 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 40883036 |
| 66 | NC_018767 | ATTT | 3 | 111952 | 111962 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 40883036 |
| 67 | NC_018767 | TTGA | 3 | 116721 | 116732 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 68 | NC_018767 | TTAT | 3 | 120350 | 120360 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 40883037 |
| 69 | NC_018767 | AATC | 3 | 122348 | 122359 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 40883037 |
| 70 | NC_018767 | TGGG | 3 | 124325 | 124335 | 11 | 0 % | 25 % | 75 % | 0 % | 9 % | 40883037 |
| 71 | NC_018767 | TCAA | 3 | 125652 | 125662 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 72 | NC_018767 | TTAT | 3 | 125812 | 125823 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 73 | NC_018767 | ATTT | 3 | 127803 | 127815 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 74 | NC_018767 | ATTT | 3 | 127867 | 127878 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |