All Imperfect Repeats of Trebouxiophyceae sp. MX-AZ01 chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_018569 | AGCG | 3 | 252 | 262 | 11 | 25 % | 0 % | 50 % | 25 % | 9 % | Non-Coding |
2 | NC_018569 | GTAG | 3 | 329 | 339 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | Non-Coding |
3 | NC_018569 | GGGT | 3 | 830 | 841 | 12 | 0 % | 25 % | 75 % | 0 % | 8 % | Non-Coding |
4 | NC_018569 | GGGA | 3 | 3441 | 3451 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | 40905246 |
5 | NC_018569 | TCCC | 3 | 3610 | 3620 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 40905246 |
6 | NC_018569 | ATGG | 3 | 4498 | 4508 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 40905246 |
7 | NC_018569 | CAA | 4 | 5917 | 5928 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | Non-Coding |
8 | NC_018569 | CCA | 4 | 7656 | 7666 | 11 | 33.33 % | 0 % | 0 % | 66.67 % | 9 % | Non-Coding |
9 | NC_018569 | TAC | 4 | 9216 | 9226 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | Non-Coding |
10 | NC_018569 | AACAGG | 3 | 12664 | 12681 | 18 | 50 % | 0 % | 33.33 % | 16.67 % | 5 % | Non-Coding |
11 | NC_018569 | AGAT | 3 | 12835 | 12846 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
12 | NC_018569 | GCCT | 3 | 13043 | 13053 | 11 | 0 % | 25 % | 25 % | 50 % | 9 % | Non-Coding |
13 | NC_018569 | TCTT | 3 | 14465 | 14476 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
14 | NC_018569 | AG | 6 | 16953 | 16964 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | Non-Coding |
15 | NC_018569 | GACC | 3 | 17791 | 17801 | 11 | 25 % | 0 % | 25 % | 50 % | 9 % | Non-Coding |
16 | NC_018569 | AGCC | 3 | 18134 | 18145 | 12 | 25 % | 0 % | 25 % | 50 % | 8 % | 40905246 |
17 | NC_018569 | TGC | 4 | 18746 | 18757 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 40905246 |
18 | NC_018569 | GTT | 5 | 21389 | 21403 | 15 | 0 % | 66.67 % | 33.33 % | 0 % | 6 % | 40905246 |
19 | NC_018569 | GAAA | 4 | 25918 | 25933 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
20 | NC_018569 | TCT | 4 | 27342 | 27352 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 40905247 |
21 | NC_018569 | AAACA | 3 | 28763 | 28777 | 15 | 80 % | 0 % | 0 % | 20 % | 6 % | Non-Coding |
22 | NC_018569 | GTG | 4 | 29117 | 29129 | 13 | 0 % | 33.33 % | 66.67 % | 0 % | 7 % | Non-Coding |
23 | NC_018569 | GGAT | 3 | 31932 | 31942 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | Non-Coding |
24 | NC_018569 | GGCC | 3 | 32179 | 32190 | 12 | 0 % | 0 % | 50 % | 50 % | 8 % | Non-Coding |
25 | NC_018569 | ATG | 4 | 35280 | 35290 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 40905247 |
26 | NC_018569 | GCT | 4 | 37322 | 37333 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 40905247 |
27 | NC_018569 | GCCC | 3 | 37414 | 37424 | 11 | 0 % | 0 % | 25 % | 75 % | 9 % | 40905247 |
28 | NC_018569 | TGCAA | 3 | 39345 | 39359 | 15 | 40 % | 20 % | 20 % | 20 % | 6 % | 40905247 |
29 | NC_018569 | CCCT | 3 | 40376 | 40386 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | Non-Coding |
30 | NC_018569 | ACA | 4 | 40463 | 40474 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | Non-Coding |
31 | NC_018569 | GA | 6 | 40570 | 40581 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 40905247 |
32 | NC_018569 | CTC | 4 | 42228 | 42239 | 12 | 0 % | 33.33 % | 0 % | 66.67 % | 8 % | 40905247 |
33 | NC_018569 | AGGC | 4 | 42298 | 42313 | 16 | 25 % | 0 % | 50 % | 25 % | 6 % | 40905247 |
34 | NC_018569 | CCGG | 3 | 42907 | 42918 | 12 | 0 % | 0 % | 50 % | 50 % | 8 % | 40905247 |
35 | NC_018569 | ATGG | 3 | 43643 | 43654 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 40905247 |
36 | NC_018569 | CCTCT | 3 | 48220 | 48234 | 15 | 0 % | 40 % | 0 % | 60 % | 6 % | Non-Coding |
37 | NC_018569 | GATG | 3 | 48607 | 48618 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 40905248 |
38 | NC_018569 | TCCA | 3 | 50407 | 50418 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 40905248 |
39 | NC_018569 | TGC | 5 | 52191 | 52205 | 15 | 0 % | 33.33 % | 33.33 % | 33.33 % | 6 % | 40905248 |
40 | NC_018569 | G | 17 | 55410 | 55426 | 17 | 0 % | 0 % | 100 % | 0 % | 5 % | Non-Coding |
41 | NC_018569 | AGC | 4 | 56658 | 56669 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | Non-Coding |
42 | NC_018569 | AGC | 4 | 56681 | 56691 | 11 | 33.33 % | 0 % | 33.33 % | 33.33 % | 9 % | Non-Coding |
43 | NC_018569 | ACC | 4 | 56975 | 56987 | 13 | 33.33 % | 0 % | 0 % | 66.67 % | 7 % | Non-Coding |
44 | NC_018569 | GGCG | 3 | 58138 | 58149 | 12 | 0 % | 0 % | 75 % | 25 % | 8 % | Non-Coding |
45 | NC_018569 | GTG | 4 | 59562 | 59572 | 11 | 0 % | 33.33 % | 66.67 % | 0 % | 9 % | 40905248 |
46 | NC_018569 | TGCAA | 3 | 61118 | 61132 | 15 | 40 % | 20 % | 20 % | 20 % | 6 % | Non-Coding |
47 | NC_018569 | TTGG | 3 | 61298 | 61309 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 40905248 |
48 | NC_018569 | CCAATG | 4 | 61767 | 61790 | 24 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 4 % | 40905248 |
49 | NC_018569 | TGC | 4 | 63832 | 63843 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | Non-Coding |
50 | NC_018569 | TCA | 4 | 66195 | 66206 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | Non-Coding |
51 | NC_018569 | CAT | 4 | 67815 | 67826 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 40905248 |
52 | NC_018569 | AGG | 4 | 69612 | 69623 | 12 | 33.33 % | 0 % | 66.67 % | 0 % | 8 % | 40905248 |
53 | NC_018569 | CCAT | 3 | 69918 | 69929 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 40905248 |
54 | NC_018569 | GGA | 5 | 69970 | 69984 | 15 | 33.33 % | 0 % | 66.67 % | 0 % | 6 % | 40905248 |
55 | NC_018569 | GTG | 4 | 71730 | 71741 | 12 | 0 % | 33.33 % | 66.67 % | 0 % | 8 % | 40905248 |
56 | NC_018569 | ACC | 4 | 73734 | 73745 | 12 | 33.33 % | 0 % | 0 % | 66.67 % | 8 % | 40905248 |
57 | NC_018569 | AGCA | 3 | 73809 | 73820 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | 40905248 |
58 | NC_018569 | ACCC | 3 | 73951 | 73962 | 12 | 25 % | 0 % | 0 % | 75 % | 8 % | 40905248 |
59 | NC_018569 | GGCG | 3 | 74050 | 74061 | 12 | 0 % | 0 % | 75 % | 25 % | 8 % | 40905248 |
60 | NC_018569 | GAAG | 3 | 76672 | 76683 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | Non-Coding |
61 | NC_018569 | CGT | 4 | 77118 | 77129 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | Non-Coding |
62 | NC_018569 | TTCG | 3 | 81807 | 81817 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 40905249 |
63 | NC_018569 | GGA | 4 | 84958 | 84968 | 11 | 33.33 % | 0 % | 66.67 % | 0 % | 9 % | 40905249 |
64 | NC_018569 | CCTC | 3 | 85380 | 85391 | 12 | 0 % | 25 % | 0 % | 75 % | 8 % | Non-Coding |
65 | NC_018569 | GATG | 3 | 86532 | 86543 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
66 | NC_018569 | GGA | 4 | 87664 | 87674 | 11 | 33.33 % | 0 % | 66.67 % | 0 % | 9 % | 40905249 |
67 | NC_018569 | G | 12 | 89207 | 89218 | 12 | 0 % | 0 % | 100 % | 0 % | 8 % | Non-Coding |
68 | NC_018569 | AG | 6 | 89424 | 89434 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
69 | NC_018569 | GCC | 4 | 89813 | 89824 | 12 | 0 % | 0 % | 33.33 % | 66.67 % | 8 % | Non-Coding |
70 | NC_018569 | GCA | 4 | 90388 | 90398 | 11 | 33.33 % | 0 % | 33.33 % | 33.33 % | 9 % | 40905249 |
71 | NC_018569 | CGC | 4 | 90704 | 90715 | 12 | 0 % | 0 % | 33.33 % | 66.67 % | 8 % | Non-Coding |
72 | NC_018569 | GT | 6 | 91366 | 91376 | 11 | 0 % | 50 % | 50 % | 0 % | 9 % | 40905250 |
73 | NC_018569 | TTGC | 3 | 92323 | 92334 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | Non-Coding |
74 | NC_018569 | GCCCC | 3 | 92417 | 92430 | 14 | 0 % | 0 % | 20 % | 80 % | 7 % | Non-Coding |
75 | NC_018569 | CCA | 4 | 92530 | 92541 | 12 | 33.33 % | 0 % | 0 % | 66.67 % | 8 % | Non-Coding |
76 | NC_018569 | AGG | 4 | 96574 | 96585 | 12 | 33.33 % | 0 % | 66.67 % | 0 % | 8 % | Non-Coding |
77 | NC_018569 | GC | 6 | 98503 | 98513 | 11 | 0 % | 0 % | 50 % | 50 % | 9 % | 40905250 |
78 | NC_018569 | CTT | 4 | 99027 | 99038 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 0 % | 40905250 |
79 | NC_018569 | TGC | 4 | 99072 | 99083 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 40905250 |
80 | NC_018569 | GAAT | 3 | 99449 | 99460 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
81 | NC_018569 | AT | 6 | 99469 | 99479 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
82 | NC_018569 | GCC | 4 | 100223 | 100233 | 11 | 0 % | 0 % | 33.33 % | 66.67 % | 9 % | Non-Coding |
83 | NC_018569 | AGCC | 3 | 102600 | 102615 | 16 | 25 % | 0 % | 25 % | 50 % | 6 % | Non-Coding |
84 | NC_018569 | GGCC | 3 | 107095 | 107106 | 12 | 0 % | 0 % | 50 % | 50 % | 8 % | 40905251 |
85 | NC_018569 | TGGC | 3 | 108700 | 108711 | 12 | 0 % | 25 % | 50 % | 25 % | 8 % | 40905251 |
86 | NC_018569 | ATCC | 3 | 109677 | 109687 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | Non-Coding |
87 | NC_018569 | CT | 6 | 109983 | 109993 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
88 | NC_018569 | C | 13 | 112552 | 112564 | 13 | 0 % | 0 % | 0 % | 100 % | 7 % | Non-Coding |
89 | NC_018569 | GAT | 4 | 117170 | 117180 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 40905251 |
90 | NC_018569 | AAG | 4 | 117346 | 117357 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 40905251 |
91 | NC_018569 | ACCC | 3 | 120088 | 120099 | 12 | 25 % | 0 % | 0 % | 75 % | 8 % | 40905252 |
92 | NC_018569 | GGC | 4 | 120879 | 120890 | 12 | 0 % | 0 % | 66.67 % | 33.33 % | 8 % | Non-Coding |
93 | NC_018569 | TCA | 4 | 121220 | 121231 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 40905252 |
94 | NC_018569 | GAG | 4 | 126746 | 126757 | 12 | 33.33 % | 0 % | 66.67 % | 0 % | 8 % | Non-Coding |
95 | NC_018569 | GGT | 4 | 128862 | 128873 | 12 | 0 % | 33.33 % | 66.67 % | 0 % | 8 % | 40905253 |
96 | NC_018569 | CAT | 4 | 130646 | 130656 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | Non-Coding |
97 | NC_018569 | AGC | 4 | 132067 | 132077 | 11 | 33.33 % | 0 % | 33.33 % | 33.33 % | 9 % | Non-Coding |
98 | NC_018569 | GATT | 3 | 132298 | 132308 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 40905253 |
99 | NC_018569 | GCCC | 3 | 132544 | 132554 | 11 | 0 % | 0 % | 25 % | 75 % | 9 % | Non-Coding |
100 | NC_018569 | GGT | 4 | 133805 | 133816 | 12 | 0 % | 33.33 % | 66.67 % | 0 % | 8 % | 40905253 |
101 | NC_018569 | CGG | 4 | 134616 | 134627 | 12 | 0 % | 0 % | 66.67 % | 33.33 % | 8 % | Non-Coding |
102 | NC_018569 | AGG | 4 | 135704 | 135715 | 12 | 33.33 % | 0 % | 66.67 % | 0 % | 8 % | 40905253 |
103 | NC_018569 | CG | 6 | 136755 | 136765 | 11 | 0 % | 0 % | 50 % | 50 % | 9 % | Non-Coding |
104 | NC_018569 | CGGG | 3 | 136791 | 136802 | 12 | 0 % | 0 % | 75 % | 25 % | 8 % | Non-Coding |
105 | NC_018569 | CT | 6 | 137237 | 137247 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
106 | NC_018569 | TGT | 4 | 137298 | 137308 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | Non-Coding |
107 | NC_018569 | TGC | 4 | 137927 | 137937 | 11 | 0 % | 33.33 % | 33.33 % | 33.33 % | 9 % | Non-Coding |
108 | NC_018569 | GA | 7 | 139247 | 139259 | 13 | 50 % | 0 % | 50 % | 0 % | 7 % | 40905253 |
109 | NC_018569 | CCAG | 3 | 140456 | 140468 | 13 | 25 % | 0 % | 25 % | 50 % | 7 % | Non-Coding |
110 | NC_018569 | CCCT | 3 | 145803 | 145814 | 12 | 0 % | 25 % | 0 % | 75 % | 8 % | Non-Coding |
111 | NC_018569 | CTCC | 3 | 146121 | 146131 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | Non-Coding |
112 | NC_018569 | CTT | 4 | 148277 | 148288 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 0 % | 40905254 |
113 | NC_018569 | GAA | 4 | 148319 | 148330 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 40905254 |
114 | NC_018569 | GGC | 4 | 148659 | 148670 | 12 | 0 % | 0 % | 66.67 % | 33.33 % | 8 % | Non-Coding |
115 | NC_018569 | TGG | 4 | 148672 | 148683 | 12 | 0 % | 33.33 % | 66.67 % | 0 % | 8 % | Non-Coding |