Tetra-nucleotide Imperfect Repeats of Capsicum annuum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_018552 | TTCT | 3 | 165 | 177 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 2 | NC_018552 | AAAG | 4 | 466 | 481 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 3 | NC_018552 | AAGT | 3 | 1264 | 1274 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 40447450 |
| 4 | NC_018552 | CATT | 3 | 4152 | 4163 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 5 | NC_018552 | GAAA | 3 | 4495 | 4505 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 6 | NC_018552 | TAAA | 3 | 4508 | 4519 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_018552 | ATTT | 3 | 4912 | 4922 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 8 | NC_018552 | TTTC | 3 | 5515 | 5525 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 40447450 |
| 9 | NC_018552 | AATA | 3 | 6020 | 6031 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 40447450 |
| 10 | NC_018552 | GAAT | 3 | 6556 | 6567 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 11 | NC_018552 | AATA | 3 | 6828 | 6839 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 12 | NC_018552 | GTTT | 3 | 7617 | 7629 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 13 | NC_018552 | TTAC | 3 | 7846 | 7858 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 14 | NC_018552 | TTCT | 3 | 8059 | 8069 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 40447450 |
| 15 | NC_018552 | TCTT | 6 | 8846 | 8869 | 24 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 16 | NC_018552 | CAAG | 3 | 9137 | 9147 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | Non-Coding |
| 17 | NC_018552 | AAAG | 3 | 9699 | 9710 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 18 | NC_018552 | AAAG | 3 | 9752 | 9762 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 19 | NC_018552 | ATGA | 3 | 12675 | 12687 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 40447451 |
| 20 | NC_018552 | AAAT | 3 | 12771 | 12781 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 40447451 |
| 21 | NC_018552 | TAAA | 3 | 13487 | 13498 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 22 | NC_018552 | AAAT | 3 | 14730 | 14741 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 23 | NC_018552 | TATT | 3 | 16151 | 16163 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 24 | NC_018552 | AAAC | 3 | 18955 | 18965 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 40447451 |
| 25 | NC_018552 | TCAT | 3 | 27497 | 27507 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 26 | NC_018552 | AAAT | 3 | 30330 | 30340 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 27 | NC_018552 | CTAT | 3 | 30595 | 30606 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
| 28 | NC_018552 | TTAA | 3 | 30724 | 30734 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 40447451 |
| 29 | NC_018552 | CCAA | 3 | 31064 | 31076 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | Non-Coding |
| 30 | NC_018552 | TTCT | 3 | 31108 | 31119 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 31 | NC_018552 | TATT | 3 | 32403 | 32413 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 32 | NC_018552 | AAAG | 3 | 32795 | 32806 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 33 | NC_018552 | ATGA | 3 | 33212 | 33222 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 34 | NC_018552 | CTTT | 3 | 36757 | 36768 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 35 | NC_018552 | AAAT | 3 | 37165 | 37175 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 36 | NC_018552 | ATTG | 3 | 39998 | 40008 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 40447452 |
| 37 | NC_018552 | AATG | 3 | 41644 | 41655 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 40447452 |
| 38 | NC_018552 | TTTA | 3 | 43399 | 43410 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 39 | NC_018552 | ATAA | 3 | 43807 | 43818 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 40 | NC_018552 | ATAA | 8 | 43834 | 43865 | 32 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 41 | NC_018552 | TATT | 4 | 48051 | 48065 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 42 | NC_018552 | AAGG | 3 | 48288 | 48298 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
| 43 | NC_018552 | AATT | 3 | 52992 | 53003 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 44 | NC_018552 | AAAT | 3 | 56885 | 56896 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 45 | NC_018552 | TAAA | 3 | 57460 | 57470 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 46 | NC_018552 | TGAT | 3 | 57557 | 57568 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 47 | NC_018552 | TAAA | 3 | 61651 | 61663 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 48 | NC_018552 | TTTC | 3 | 67967 | 67977 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 49 | NC_018552 | ATGA | 3 | 68186 | 68197 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 50 | NC_018552 | AAAT | 4 | 69949 | 69964 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 51 | NC_018552 | AAAC | 3 | 71149 | 71160 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 52 | NC_018552 | TGAA | 3 | 72106 | 72117 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 53 | NC_018552 | TTTC | 3 | 73690 | 73700 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 40447450 |
| 54 | NC_018552 | GGTT | 3 | 76680 | 76691 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 40447450 |
| 55 | NC_018552 | TTTA | 3 | 83789 | 83800 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 40447450 |
| 56 | NC_018552 | TCTT | 3 | 85606 | 85616 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 40447450 |
| 57 | NC_018552 | GTTT | 3 | 85648 | 85658 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 40447450 |
| 58 | NC_018552 | CAAT | 3 | 86057 | 86067 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 40447450 |
| 59 | NC_018552 | AATA | 3 | 95202 | 95214 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 40447450 |
| 60 | NC_018552 | ATCC | 3 | 105742 | 105753 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 40447454 |
| 61 | NC_018552 | AAGG | 3 | 106050 | 106060 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 40447454 |
| 62 | NC_018552 | GAGG | 3 | 108781 | 108792 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 40447454 |
| 63 | NC_018552 | AGGT | 3 | 108996 | 109007 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 40447454 |
| 64 | NC_018552 | TAAG | 3 | 110121 | 110131 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 40447454 |
| 65 | NC_018552 | GGAA | 3 | 112171 | 112181 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 40447454 |
| 66 | NC_018552 | AAAT | 3 | 114710 | 114720 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 40447454 |
| 67 | NC_018552 | ATAA | 4 | 116366 | 116381 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 40447454 |
| 68 | NC_018552 | GAAA | 3 | 118091 | 118102 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 40447454 |
| 69 | NC_018552 | TTGA | 3 | 120174 | 120185 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 40447454 |
| 70 | NC_018552 | TAGA | 3 | 124113 | 124124 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 40447454 |
| 71 | NC_018552 | TTTA | 3 | 127292 | 127303 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 40447454 |
| 72 | NC_018552 | AAAG | 3 | 129758 | 129768 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 40447454 |
| 73 | NC_018552 | CTTT | 3 | 130631 | 130641 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 40447454 |
| 74 | NC_018552 | TTCC | 3 | 131967 | 131977 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 40447454 |
| 75 | NC_018552 | CTTA | 3 | 134017 | 134027 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 40447454 |
| 76 | NC_018552 | CCTT | 3 | 138088 | 138098 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 40447454 |
| 77 | NC_018552 | GGAT | 3 | 138395 | 138406 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 40447454 |
| 78 | NC_018552 | CGAA | 3 | 140996 | 141007 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | 40447454 |
| 79 | NC_018552 | TATT | 3 | 148934 | 148946 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 40447458 |
| 80 | NC_018552 | TGAT | 3 | 149936 | 149948 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 40447458 |
| 81 | NC_018552 | GATC | 3 | 149963 | 149973 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 40447458 |
| 82 | NC_018552 | ATTT | 3 | 152737 | 152748 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 40447458 |