Tetra-nucleotide Imperfect Repeats of Saccharina japonica chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_018523 | AACT | 3 | 1198 | 1209 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 2 | NC_018523 | CAGG | 3 | 2476 | 2487 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | Non-Coding |
| 3 | NC_018523 | TTTC | 3 | 4706 | 4716 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 4 | NC_018523 | ATTA | 3 | 11371 | 11382 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 5 | NC_018523 | TTGT | 3 | 14443 | 14454 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 40306653 |
| 6 | NC_018523 | TTAT | 3 | 14835 | 14846 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 40306653 |
| 7 | NC_018523 | ATAA | 3 | 15409 | 15420 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 40306653 |
| 8 | NC_018523 | TTTC | 3 | 16141 | 16152 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 40306653 |
| 9 | NC_018523 | AATA | 3 | 16453 | 16464 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 40306653 |
| 10 | NC_018523 | AATT | 3 | 17834 | 17846 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 40306653 |
| 11 | NC_018523 | GTTA | 3 | 18821 | 18831 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 40306653 |
| 12 | NC_018523 | AATG | 3 | 19397 | 19407 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 40306653 |
| 13 | NC_018523 | TAAA | 3 | 22003 | 22013 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 40306653 |
| 14 | NC_018523 | CTTT | 3 | 23745 | 23755 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 40306653 |
| 15 | NC_018523 | TTAG | 3 | 24452 | 24462 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 16 | NC_018523 | AATA | 4 | 24578 | 24593 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 17 | NC_018523 | TAAA | 3 | 27372 | 27382 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 18 | NC_018523 | ATTG | 3 | 28815 | 28826 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 40306654 |
| 19 | NC_018523 | AAGA | 3 | 29852 | 29862 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 40306654 |
| 20 | NC_018523 | GTAA | 3 | 32304 | 32315 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 40306654 |
| 21 | NC_018523 | ATTT | 3 | 32700 | 32711 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 40306654 |
| 22 | NC_018523 | TTCT | 3 | 36353 | 36363 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 40306654 |
| 23 | NC_018523 | CATT | 3 | 39871 | 39881 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 40306654 |
| 24 | NC_018523 | TTTA | 3 | 40234 | 40244 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 25 | NC_018523 | AAAC | 3 | 41272 | 41283 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 26 | NC_018523 | ATAA | 3 | 42814 | 42825 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 27 | NC_018523 | CAAA | 3 | 45763 | 45774 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 40306655 |
| 28 | NC_018523 | TGTT | 3 | 47004 | 47015 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 40306656 |
| 29 | NC_018523 | AATT | 3 | 47437 | 47448 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_018523 | AAAT | 3 | 47666 | 47677 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 40306656 |
| 31 | NC_018523 | TAAA | 3 | 48070 | 48081 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 40306656 |
| 32 | NC_018523 | TAAA | 3 | 48277 | 48288 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 40306656 |
| 33 | NC_018523 | TAAA | 3 | 49197 | 49208 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_018523 | AAAT | 3 | 57831 | 57842 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 35 | NC_018523 | ATAA | 3 | 58663 | 58674 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 40306657 |
| 36 | NC_018523 | AAGT | 3 | 59072 | 59083 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 37 | NC_018523 | AATT | 3 | 63100 | 63110 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 40306657 |
| 38 | NC_018523 | TAAA | 3 | 65717 | 65727 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 40306657 |
| 39 | NC_018523 | ATAA | 3 | 65787 | 65797 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 40306657 |
| 40 | NC_018523 | ATTT | 3 | 69664 | 69675 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 41 | NC_018523 | TTAA | 3 | 74526 | 74538 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 40306658 |
| 42 | NC_018523 | AATA | 3 | 74968 | 74979 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 43 | NC_018523 | GCGA | 3 | 78151 | 78161 | 11 | 25 % | 0 % | 50 % | 25 % | 9 % | Non-Coding |
| 44 | NC_018523 | ATAA | 4 | 78280 | 78295 | 16 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 45 | NC_018523 | TTAA | 3 | 78329 | 78340 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 40306659 |
| 46 | NC_018523 | ATAA | 3 | 78459 | 78470 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 40306659 |
| 47 | NC_018523 | AAAT | 3 | 78742 | 78752 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 40306659 |
| 48 | NC_018523 | TTCT | 4 | 78900 | 78916 | 17 | 0 % | 75 % | 0 % | 25 % | 5 % | Non-Coding |
| 49 | NC_018523 | AAAG | 3 | 81747 | 81757 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 40306659 |
| 50 | NC_018523 | GAAA | 3 | 82694 | 82704 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 51 | NC_018523 | TAAA | 3 | 87437 | 87448 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 52 | NC_018523 | AACA | 3 | 87635 | 87645 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 40306660 |
| 53 | NC_018523 | GATA | 3 | 88954 | 88964 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 40306660 |
| 54 | NC_018523 | CATT | 3 | 89825 | 89836 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 40306660 |
| 55 | NC_018523 | AAGA | 3 | 90327 | 90338 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 40306660 |
| 56 | NC_018523 | AAAG | 3 | 92217 | 92227 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 40306660 |
| 57 | NC_018523 | AAAT | 3 | 94881 | 94891 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 40306661 |
| 58 | NC_018523 | AAAT | 3 | 95281 | 95292 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 40306661 |
| 59 | NC_018523 | AGAA | 3 | 99977 | 99988 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 40306662 |
| 60 | NC_018523 | ATTA | 3 | 100634 | 100645 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 61 | NC_018523 | TTAA | 3 | 105773 | 105785 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 62 | NC_018523 | TTAA | 3 | 106193 | 106204 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 63 | NC_018523 | TATT | 3 | 114475 | 114486 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 40306664 |
| 64 | NC_018523 | ATTT | 3 | 115156 | 115167 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 40306664 |
| 65 | NC_018523 | ATTT | 3 | 119621 | 119632 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 40306664 |
| 66 | NC_018523 | TCTA | 3 | 120829 | 120839 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 67 | NC_018523 | AATT | 3 | 123297 | 123308 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 40306665 |
| 68 | NC_018523 | ATAA | 3 | 125042 | 125053 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 69 | NC_018523 | TTTA | 3 | 130027 | 130037 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 70 | NC_018523 | TTAA | 3 | 130395 | 130406 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 40306665 |
| 71 | NC_018523 | TTTA | 3 | 130548 | 130559 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |