Tetra-nucleotide Imperfect Repeats of Gossypium areysianum chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_018112 | ATTC | 3 | 152 | 162 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 2 | NC_018112 | AAGT | 3 | 1125 | 1135 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 39483087 |
| 3 | NC_018112 | AAAT | 3 | 2029 | 2040 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_018112 | GATG | 3 | 3162 | 3174 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | 39483087 |
| 5 | NC_018112 | ATCT | 3 | 4679 | 4690 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 6 | NC_018112 | TTCA | 3 | 4939 | 4950 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 7 | NC_018112 | AAAT | 4 | 6466 | 6481 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 8 | NC_018112 | TTTA | 3 | 6551 | 6562 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_018112 | ATAG | 3 | 8360 | 8371 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 10 | NC_018112 | ATTT | 3 | 8630 | 8641 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 11 | NC_018112 | AATC | 3 | 8712 | 8722 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 12 | NC_018112 | AAAT | 3 | 12557 | 12567 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 39483094 |
| 13 | NC_018112 | TTTC | 3 | 12641 | 12652 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 39483094 |
| 14 | NC_018112 | TCTA | 3 | 13432 | 13443 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 15 | NC_018112 | AAAT | 3 | 14053 | 14064 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 16 | NC_018112 | TTTA | 4 | 14658 | 14672 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 17 | NC_018112 | TTTA | 3 | 23279 | 23290 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 39483087 |
| 18 | NC_018112 | GATA | 3 | 27109 | 27119 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 39483088 |
| 19 | NC_018112 | CTAA | 3 | 28939 | 28950 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 20 | NC_018112 | GAAA | 3 | 31276 | 31287 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 21 | NC_018112 | ATCA | 3 | 31476 | 31486 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 22 | NC_018112 | TTCA | 4 | 32315 | 32330 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 23 | NC_018112 | AATA | 3 | 33336 | 33347 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 24 | NC_018112 | TCTT | 3 | 33414 | 33426 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 25 | NC_018112 | GTTT | 3 | 33752 | 33763 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 26 | NC_018112 | GAAA | 3 | 35747 | 35758 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 39483088 |
| 27 | NC_018112 | TTGC | 3 | 36148 | 36158 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 39483088 |
| 28 | NC_018112 | ATCT | 3 | 37168 | 37179 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 29 | NC_018112 | AAAT | 3 | 37232 | 37243 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_018112 | TGAA | 4 | 37783 | 37797 | 15 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 31 | NC_018112 | AATT | 3 | 37844 | 37854 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 32 | NC_018112 | CTAA | 3 | 37889 | 37901 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 33 | NC_018112 | AAAT | 3 | 38095 | 38107 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 34 | NC_018112 | GATC | 3 | 38693 | 38703 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 35 | NC_018112 | AATG | 3 | 42040 | 42051 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 39483088 |
| 36 | NC_018112 | ATCT | 4 | 43764 | 43779 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 37 | NC_018112 | GTAA | 3 | 46482 | 46492 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 39483088 |
| 38 | NC_018112 | TAAA | 4 | 48143 | 48158 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 39 | NC_018112 | AAAG | 3 | 49305 | 49316 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 40 | NC_018112 | CATA | 3 | 50648 | 50658 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 41 | NC_018112 | GTTT | 3 | 50744 | 50755 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 42 | NC_018112 | ACAT | 3 | 50941 | 50951 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 43 | NC_018112 | CAAA | 3 | 52063 | 52074 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 39483089 |
| 44 | NC_018112 | GTCT | 3 | 52674 | 52685 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 39483089 |
| 45 | NC_018112 | GATT | 3 | 53477 | 53488 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 46 | NC_018112 | ATTT | 3 | 53705 | 53716 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 47 | NC_018112 | AGAA | 3 | 54303 | 54314 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 48 | NC_018112 | AAAG | 3 | 60083 | 60093 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 49 | NC_018112 | ATTT | 3 | 61811 | 61822 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 50 | NC_018112 | TAGT | 3 | 61835 | 61846 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 51 | NC_018112 | TCTA | 3 | 62858 | 62869 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 52 | NC_018112 | CTTT | 3 | 65310 | 65321 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 53 | NC_018112 | TTTC | 3 | 66666 | 66676 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 54 | NC_018112 | TAAA | 3 | 71304 | 71315 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 39483091 |
| 55 | NC_018112 | TCAT | 3 | 72855 | 72866 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 56 | NC_018112 | GAAC | 3 | 73198 | 73209 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | Non-Coding |
| 57 | NC_018112 | TTTA | 3 | 74134 | 74145 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 39483093 |
| 58 | NC_018112 | TGAA | 3 | 75957 | 75967 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 39483093 |
| 59 | NC_018112 | TTGA | 3 | 81010 | 81022 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 39483093 |
| 60 | NC_018112 | TTTC | 3 | 81945 | 81955 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 39483093 |
| 61 | NC_018112 | CTTT | 3 | 83879 | 83889 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 39483093 |
| 62 | NC_018112 | TTTC | 3 | 86231 | 86242 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 39483093 |
| 63 | NC_018112 | ATTT | 3 | 86578 | 86589 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 39483093 |
| 64 | NC_018112 | AATT | 3 | 87078 | 87088 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 39483093 |
| 65 | NC_018112 | TTAT | 3 | 87215 | 87226 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 39483093 |
| 66 | NC_018112 | AATT | 3 | 87857 | 87868 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 39483093 |
| 67 | NC_018112 | TTCT | 3 | 91871 | 91881 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 39483093 |
| 68 | NC_018112 | ATCG | 3 | 92629 | 92641 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 39483093 |
| 69 | NC_018112 | CTTT | 3 | 93058 | 93068 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 39483093 |
| 70 | NC_018112 | TGAT | 3 | 94940 | 94952 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 39483093 |
| 71 | NC_018112 | AATA | 3 | 95823 | 95835 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 39483093 |
| 72 | NC_018112 | TCTA | 3 | 107511 | 107522 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 39483095 |
| 73 | NC_018112 | AAGG | 3 | 107660 | 107670 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 39483095 |
| 74 | NC_018112 | GAGG | 3 | 110384 | 110395 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 39483095 |
| 75 | NC_018112 | AGGT | 3 | 110596 | 110607 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 39483095 |
| 76 | NC_018112 | TAAG | 3 | 111716 | 111726 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 39483095 |
| 77 | NC_018112 | AACA | 3 | 115482 | 115493 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 39483095 |
| 78 | NC_018112 | TCTT | 3 | 115879 | 115890 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 39483095 |
| 79 | NC_018112 | AGTT | 3 | 117329 | 117339 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 39483095 |
| 80 | NC_018112 | GAAT | 3 | 117487 | 117498 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 39483095 |
| 81 | NC_018112 | ATTA | 3 | 117650 | 117661 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 39483095 |
| 82 | NC_018112 | CAAA | 3 | 124277 | 124287 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 39483095 |
| 83 | NC_018112 | ATCA | 3 | 125522 | 125533 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 39483095 |
| 84 | NC_018112 | TCTT | 3 | 127756 | 127766 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 39483095 |
| 85 | NC_018112 | ATTT | 3 | 129307 | 129319 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 39483095 |
| 86 | NC_018112 | AACA | 3 | 130618 | 130629 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 39483095 |
| 87 | NC_018112 | ATTT | 3 | 132318 | 132328 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 39483095 |
| 88 | NC_018112 | ATTT | 3 | 133291 | 133303 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 39483095 |
| 89 | NC_018112 | AATT | 3 | 133925 | 133935 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 39483095 |
| 90 | NC_018112 | CTTA | 3 | 136029 | 136039 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 39483095 |
| 91 | NC_018112 | CCTT | 3 | 140085 | 140095 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 39483095 |
| 92 | NC_018112 | GGAT | 3 | 140628 | 140639 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 39483095 |
| 93 | NC_018112 | AATA | 4 | 144547 | 144562 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 39483095 |
| 94 | NC_018112 | TTTC | 3 | 149175 | 149186 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 95 | NC_018112 | ATCA | 3 | 152845 | 152857 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 39483094 |
| 96 | NC_018112 | TGAT | 3 | 152940 | 152952 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 39483094 |
| 97 | NC_018112 | AAAG | 3 | 154687 | 154697 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 39483094 |
| 98 | NC_018112 | CGAT | 3 | 155114 | 155126 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 39483094 |
| 99 | NC_018112 | TATT | 3 | 155746 | 155757 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 39483094 |