Penta-nucleotide Imperfect Repeats of Gossypium somalense chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_018110 | TTAAA | 4 | 1843 | 1861 | 19 | 60 % | 40 % | 0 % | 0 % | 10 % | Non-Coding |
2 | NC_018110 | CAATA | 3 | 4581 | 4596 | 16 | 60 % | 20 % | 0 % | 20 % | 6 % | Non-Coding |
3 | NC_018110 | TTTTA | 3 | 4893 | 4907 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
4 | NC_018110 | ATTCT | 3 | 9926 | 9939 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
5 | NC_018110 | AGAAT | 4 | 44448 | 44467 | 20 | 60 % | 20 % | 20 % | 0 % | 10 % | Non-Coding |
6 | NC_018110 | AAATA | 3 | 46415 | 46429 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 39483071 |
7 | NC_018110 | AGAAT | 3 | 50200 | 50214 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
8 | NC_018110 | TTATT | 3 | 50960 | 50973 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
9 | NC_018110 | GTATA | 3 | 53529 | 53544 | 16 | 40 % | 40 % | 20 % | 0 % | 6 % | Non-Coding |
10 | NC_018110 | TTAAT | 4 | 54047 | 54065 | 19 | 40 % | 60 % | 0 % | 0 % | 10 % | Non-Coding |
11 | NC_018110 | TTTCA | 3 | 57835 | 57848 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
12 | NC_018110 | TTTTC | 3 | 74052 | 74066 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 39483075 |
13 | NC_018110 | TTATA | 3 | 78843 | 78856 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 39483075 |
14 | NC_018110 | CACTT | 3 | 83631 | 83644 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | 39483075 |
15 | NC_018110 | TATCA | 3 | 85686 | 85701 | 16 | 40 % | 40 % | 0 % | 20 % | 6 % | 39483075 |
16 | NC_018110 | ATATG | 3 | 90096 | 90110 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 39483075 |
17 | NC_018110 | AACGG | 3 | 91680 | 91693 | 14 | 40 % | 0 % | 40 % | 20 % | 7 % | 39483075 |
18 | NC_018110 | GAAAG | 3 | 97860 | 97875 | 16 | 60 % | 0 % | 40 % | 0 % | 6 % | 39483075 |
19 | NC_018110 | TCCGG | 3 | 98720 | 98734 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 39483075 |
20 | NC_018110 | TTCTA | 5 | 103729 | 103752 | 24 | 20 % | 60 % | 0 % | 20 % | 8 % | 39483077 |
21 | NC_018110 | AGAAA | 3 | 113610 | 113625 | 16 | 80 % | 0 % | 20 % | 0 % | 6 % | 39483077 |
22 | NC_018110 | AAATA | 3 | 123213 | 123226 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 39483077 |
23 | NC_018110 | TTCTT | 3 | 126190 | 126204 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 39483077 |
24 | NC_018110 | TTTTC | 3 | 130913 | 130926 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 39483077 |
25 | NC_018110 | AATAG | 4 | 143941 | 143959 | 19 | 60 % | 20 % | 20 % | 0 % | 10 % | 39483077 |
26 | NC_018110 | ACCGG | 3 | 148955 | 148969 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
27 | NC_018110 | CTTTC | 3 | 149815 | 149830 | 16 | 0 % | 60 % | 0 % | 40 % | 6 % | Non-Coding |
28 | NC_018110 | CATAC | 3 | 150225 | 150238 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |