Tetra-nucleotide Imperfect Repeats of Gossypium somalense chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_018110 | ATTC | 3 | 152 | 162 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 2 | NC_018110 | AAGT | 3 | 1125 | 1135 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 39483069 |
| 3 | NC_018110 | AAAT | 3 | 2029 | 2040 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_018110 | GATG | 3 | 3162 | 3174 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | 39483069 |
| 5 | NC_018110 | ATCT | 3 | 4679 | 4690 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 6 | NC_018110 | TTCA | 3 | 4939 | 4950 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 7 | NC_018110 | AAAT | 4 | 6466 | 6481 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 8 | NC_018110 | TTTA | 3 | 6551 | 6562 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_018110 | ATAG | 3 | 8360 | 8371 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 10 | NC_018110 | ATTT | 3 | 8630 | 8641 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 11 | NC_018110 | AATC | 3 | 8712 | 8722 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 12 | NC_018110 | AAAT | 3 | 12557 | 12567 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 39483077 |
| 13 | NC_018110 | TTTC | 3 | 12641 | 12652 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 39483077 |
| 14 | NC_018110 | TCTA | 3 | 13432 | 13443 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 15 | NC_018110 | AAAT | 3 | 14053 | 14064 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 16 | NC_018110 | TTTA | 4 | 14658 | 14672 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 17 | NC_018110 | TTTA | 3 | 23279 | 23290 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 39483070 |
| 18 | NC_018110 | GATA | 3 | 27109 | 27119 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 39483070 |
| 19 | NC_018110 | CTAA | 3 | 28939 | 28950 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 20 | NC_018110 | GAAA | 3 | 31276 | 31287 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 21 | NC_018110 | ATCA | 3 | 31476 | 31486 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 22 | NC_018110 | TTCA | 4 | 32315 | 32330 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 23 | NC_018110 | AATA | 3 | 33336 | 33347 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 24 | NC_018110 | TCTT | 3 | 33414 | 33426 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 25 | NC_018110 | GTTT | 3 | 33752 | 33763 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 26 | NC_018110 | GAAA | 3 | 35747 | 35758 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 39483070 |
| 27 | NC_018110 | TTGC | 3 | 36148 | 36158 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 39483070 |
| 28 | NC_018110 | ATCT | 3 | 37157 | 37168 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 29 | NC_018110 | AAAT | 3 | 37221 | 37232 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_018110 | TGAA | 4 | 37772 | 37786 | 15 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 31 | NC_018110 | AATT | 3 | 37833 | 37843 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 32 | NC_018110 | CTAA | 3 | 37878 | 37890 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 33 | NC_018110 | AAAT | 3 | 38071 | 38083 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 34 | NC_018110 | GATC | 3 | 38669 | 38679 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 35 | NC_018110 | AATG | 3 | 42016 | 42027 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 39483071 |
| 36 | NC_018110 | ATCT | 4 | 43740 | 43755 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 37 | NC_018110 | GTAA | 3 | 46458 | 46468 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 39483071 |
| 38 | NC_018110 | TAAA | 4 | 48119 | 48134 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 39 | NC_018110 | AAAG | 3 | 49281 | 49292 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 40 | NC_018110 | CATA | 3 | 50624 | 50634 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 41 | NC_018110 | GTTT | 3 | 50720 | 50731 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 42 | NC_018110 | ACAT | 3 | 50917 | 50927 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 43 | NC_018110 | CAAA | 3 | 52039 | 52050 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 39483071 |
| 44 | NC_018110 | GTCT | 3 | 52650 | 52661 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 39483071 |
| 45 | NC_018110 | GATT | 3 | 53453 | 53464 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 46 | NC_018110 | ATTT | 3 | 53681 | 53692 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 47 | NC_018110 | AGAA | 3 | 54279 | 54290 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 48 | NC_018110 | AAAG | 3 | 60059 | 60069 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 49 | NC_018110 | ATTT | 3 | 61787 | 61798 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 50 | NC_018110 | TAGT | 3 | 61811 | 61822 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 51 | NC_018110 | TCTA | 3 | 62834 | 62845 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 52 | NC_018110 | CTTT | 3 | 65286 | 65297 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 53 | NC_018110 | TTTC | 3 | 66642 | 66652 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 54 | NC_018110 | TAAA | 3 | 71279 | 71290 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 39483073 |
| 55 | NC_018110 | TCAT | 3 | 72823 | 72834 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 56 | NC_018110 | GAAC | 3 | 73166 | 73177 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | Non-Coding |
| 57 | NC_018110 | TTTA | 3 | 74102 | 74113 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 39483075 |
| 58 | NC_018110 | TGAA | 3 | 75925 | 75935 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 39483075 |
| 59 | NC_018110 | TTGA | 3 | 80978 | 80990 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 39483075 |
| 60 | NC_018110 | TTTC | 3 | 81913 | 81923 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 39483075 |
| 61 | NC_018110 | CTTT | 3 | 83847 | 83857 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 39483075 |
| 62 | NC_018110 | TTTC | 3 | 86199 | 86210 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 39483075 |
| 63 | NC_018110 | ATTT | 3 | 86546 | 86557 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 39483075 |
| 64 | NC_018110 | AATT | 3 | 87046 | 87056 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 39483075 |
| 65 | NC_018110 | TTAT | 3 | 87183 | 87194 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 39483075 |
| 66 | NC_018110 | AATT | 3 | 87825 | 87836 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 39483075 |
| 67 | NC_018110 | TTCT | 3 | 91839 | 91849 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 39483075 |
| 68 | NC_018110 | ATCG | 3 | 92597 | 92609 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 39483075 |
| 69 | NC_018110 | CTTT | 3 | 93026 | 93036 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 39483075 |
| 70 | NC_018110 | TGAT | 3 | 94908 | 94920 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 39483075 |
| 71 | NC_018110 | AATA | 3 | 95791 | 95803 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 39483075 |
| 72 | NC_018110 | TCTA | 3 | 107479 | 107490 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 39483077 |
| 73 | NC_018110 | AAGG | 3 | 107628 | 107638 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 39483077 |
| 74 | NC_018110 | GAGG | 3 | 110352 | 110363 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 39483077 |
| 75 | NC_018110 | AGGT | 3 | 110564 | 110575 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 39483077 |
| 76 | NC_018110 | TAAG | 3 | 111684 | 111694 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 39483077 |
| 77 | NC_018110 | AACA | 3 | 115450 | 115461 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 39483077 |
| 78 | NC_018110 | TCTT | 3 | 115847 | 115858 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 39483077 |
| 79 | NC_018110 | AGTT | 3 | 117297 | 117307 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 39483077 |
| 80 | NC_018110 | GAAT | 3 | 117455 | 117466 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 39483077 |
| 81 | NC_018110 | ATTA | 3 | 117618 | 117629 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 39483077 |
| 82 | NC_018110 | CAAA | 3 | 124245 | 124255 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 39483077 |
| 83 | NC_018110 | ATCA | 3 | 125490 | 125501 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 39483077 |
| 84 | NC_018110 | TCTT | 3 | 127724 | 127734 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 39483077 |
| 85 | NC_018110 | ATTT | 3 | 129275 | 129287 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 39483077 |
| 86 | NC_018110 | AACA | 3 | 130585 | 130596 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 39483077 |
| 87 | NC_018110 | ATTT | 3 | 132285 | 132295 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 39483077 |
| 88 | NC_018110 | ATTT | 3 | 133258 | 133270 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 39483077 |
| 89 | NC_018110 | AATT | 3 | 133892 | 133902 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 39483077 |
| 90 | NC_018110 | CTTA | 3 | 135996 | 136006 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 39483077 |
| 91 | NC_018110 | CCTT | 3 | 140052 | 140062 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 39483077 |
| 92 | NC_018110 | GGAT | 3 | 140595 | 140606 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 39483077 |
| 93 | NC_018110 | AATA | 4 | 144514 | 144529 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 39483077 |
| 94 | NC_018110 | TTTC | 3 | 149142 | 149153 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 95 | NC_018110 | ATCA | 3 | 152812 | 152824 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 39483077 |
| 96 | NC_018110 | TGAT | 3 | 152907 | 152919 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 39483077 |
| 97 | NC_018110 | AAAG | 3 | 154654 | 154664 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 39483077 |
| 98 | NC_018110 | CGAT | 3 | 155081 | 155093 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 39483077 |
| 99 | NC_018110 | TATT | 3 | 155713 | 155724 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 39483077 |