Penta-nucleotide Imperfect Repeats of Gossypium incanum chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_018109 | TTAAA | 4 | 1844 | 1862 | 19 | 60 % | 40 % | 0 % | 0 % | 10 % | Non-Coding |
2 | NC_018109 | TTTTA | 3 | 4871 | 4885 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
3 | NC_018109 | ATTCT | 3 | 9876 | 9889 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
4 | NC_018109 | TAATT | 3 | 44261 | 44274 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
5 | NC_018109 | AGAAT | 4 | 44314 | 44333 | 20 | 60 % | 20 % | 20 % | 0 % | 10 % | Non-Coding |
6 | NC_018109 | TATTT | 3 | 49981 | 49995 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
7 | NC_018109 | AGAAT | 3 | 50055 | 50069 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
8 | NC_018109 | GTTTT | 3 | 50571 | 50584 | 14 | 0 % | 80 % | 20 % | 0 % | 7 % | Non-Coding |
9 | NC_018109 | TTATT | 3 | 50812 | 50825 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
10 | NC_018109 | TTAAT | 4 | 53870 | 53888 | 19 | 40 % | 60 % | 0 % | 0 % | 10 % | Non-Coding |
11 | NC_018109 | TTTCA | 3 | 57652 | 57665 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
12 | NC_018109 | TTATA | 3 | 78602 | 78615 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 39483067 |
13 | NC_018109 | CACTT | 3 | 83378 | 83391 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | 39483067 |
14 | NC_018109 | ATATG | 3 | 89813 | 89827 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 39483067 |
15 | NC_018109 | AACGG | 3 | 91397 | 91410 | 14 | 40 % | 0 % | 40 % | 20 % | 7 % | 39483067 |
16 | NC_018109 | GAAAG | 3 | 97577 | 97592 | 16 | 60 % | 0 % | 40 % | 0 % | 6 % | 39483067 |
17 | NC_018109 | TCCGG | 3 | 98443 | 98457 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 39483067 |
18 | NC_018109 | TTCTA | 5 | 103452 | 103475 | 24 | 20 % | 60 % | 0 % | 20 % | 8 % | 39483069 |
19 | NC_018109 | AGAAA | 3 | 113335 | 113350 | 16 | 80 % | 0 % | 20 % | 0 % | 6 % | 39483069 |
20 | NC_018109 | AAATA | 3 | 122924 | 122937 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 39483069 |
21 | NC_018109 | TTCTT | 3 | 125901 | 125915 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 39483069 |
22 | NC_018109 | TTTTC | 3 | 130605 | 130618 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 39483069 |
23 | NC_018109 | AATAG | 4 | 143613 | 143631 | 19 | 60 % | 20 % | 20 % | 0 % | 10 % | 39483069 |
24 | NC_018109 | ACCGG | 3 | 148627 | 148641 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
25 | NC_018109 | CTTTC | 3 | 149493 | 149508 | 16 | 0 % | 60 % | 0 % | 40 % | 6 % | Non-Coding |
26 | NC_018109 | CATAC | 3 | 149903 | 149916 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |