Penta-nucleotide Imperfect Repeats of Gossypium gossypioides chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017894 | TAAAG | 3 | 318 | 333 | 16 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
2 | NC_017894 | CAATA | 3 | 4556 | 4571 | 16 | 60 % | 20 % | 0 % | 20 % | 6 % | Non-Coding |
3 | NC_017894 | TTTTA | 3 | 4880 | 4894 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
4 | NC_017894 | CTTAT | 3 | 9751 | 9766 | 16 | 20 % | 60 % | 0 % | 20 % | 6 % | Non-Coding |
5 | NC_017894 | ATTCT | 3 | 9957 | 9970 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
6 | NC_017894 | TTTCT | 3 | 12667 | 12680 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 38680089 |
7 | NC_017894 | CAATA | 3 | 34268 | 34282 | 15 | 60 % | 20 % | 0 % | 20 % | 6 % | Non-Coding |
8 | NC_017894 | AAAAT | 3 | 37857 | 37871 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
9 | NC_017894 | TAATT | 3 | 44645 | 44658 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
10 | NC_017894 | AGAAT | 4 | 44705 | 44724 | 20 | 60 % | 20 % | 20 % | 0 % | 10 % | Non-Coding |
11 | NC_017894 | TATTT | 3 | 50470 | 50483 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
12 | NC_017894 | AGAAT | 3 | 50568 | 50582 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
13 | NC_017894 | GTATA | 3 | 53913 | 53928 | 16 | 40 % | 40 % | 20 % | 0 % | 6 % | Non-Coding |
14 | NC_017894 | ATTCT | 3 | 54096 | 54109 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
15 | NC_017894 | TTTTC | 4 | 64531 | 64550 | 20 | 0 % | 80 % | 0 % | 20 % | 10 % | Non-Coding |
16 | NC_017894 | TTTTC | 3 | 74681 | 74695 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 38680088 |
17 | NC_017894 | TTATA | 3 | 79478 | 79491 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 38680088 |
18 | NC_017894 | CACTT | 3 | 84266 | 84279 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | 38680088 |
19 | NC_017894 | TATCA | 3 | 86329 | 86344 | 16 | 40 % | 40 % | 0 % | 20 % | 6 % | 38680088 |
20 | NC_017894 | ATATG | 3 | 90734 | 90748 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 38680088 |
21 | NC_017894 | AACGG | 3 | 92318 | 92331 | 14 | 40 % | 0 % | 40 % | 20 % | 7 % | 38680088 |
22 | NC_017894 | GAAAG | 3 | 98493 | 98508 | 16 | 60 % | 0 % | 40 % | 0 % | 6 % | 38680088 |
23 | NC_017894 | TCCGG | 3 | 99355 | 99369 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 38680088 |
24 | NC_017894 | TTCTA | 5 | 104375 | 104398 | 24 | 20 % | 60 % | 0 % | 20 % | 8 % | 38680090 |
25 | NC_017894 | AAGAA | 3 | 104855 | 104869 | 15 | 80 % | 0 % | 20 % | 0 % | 0 % | 38680090 |
26 | NC_017894 | AGAAA | 3 | 114271 | 114286 | 16 | 80 % | 0 % | 20 % | 0 % | 6 % | 38680090 |
27 | NC_017894 | TCTTT | 3 | 123117 | 123131 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 38680090 |
28 | NC_017894 | AAATA | 3 | 123864 | 123877 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 38680090 |
29 | NC_017894 | TTCTT | 3 | 126843 | 126857 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 38680090 |
30 | NC_017894 | AATAA | 3 | 128301 | 128314 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 38680090 |
31 | NC_017894 | TTTCT | 3 | 143893 | 143907 | 15 | 0 % | 80 % | 0 % | 20 % | 0 % | 38680090 |
32 | NC_017894 | AATAG | 4 | 144368 | 144386 | 19 | 60 % | 20 % | 20 % | 0 % | 10 % | 38680090 |
33 | NC_017894 | ACCGG | 3 | 149393 | 149407 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
34 | NC_017894 | CTTTC | 3 | 150255 | 150270 | 16 | 0 % | 60 % | 0 % | 40 % | 6 % | Non-Coding |
35 | NC_017894 | CATAC | 3 | 150665 | 150678 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |